Search result

BaseInfo

ncRNA ID osa-miRf10147-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - CAUGGUACCUGUAGGUACCAG - NA
Stem-loop(if miRNA)    A -GU      U  A                 U   -CACCUG  -      GUUUAA
ACU G   CUGGUA CC AUAGGUAUCAUGUUUGG ACU       AC AUGUGG      G
||| |   |||||| || ||||||||||||||||| |||       || ||||||
UGA C   GACCAU GG UGUCCAUGGUACAGACU UGA       UG UACACC      C
   A AAU      -  A                 U   UACAUCA  A      AUUGUC
Stem-loop sequence ACUAGGUCUGGUAUCCAAUAGGUAUCAUGUUUGGUACUCACCUGACAUGUGGGUUUAAGCCUGUUACCACAUAGUACUACAUAGUUUCAGACAUGGUACCUGUAGGUACCAGUAACAAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK098950.1
ncRNA:21   GACC-AUGGAUGUCCAUGGUAC   1
  *|||-|||||||||||||||||
targets:944   AUGGAUACCUACAGGUACCAUG   965

2.0 Oryza sativa Japonica Group cDNA clone:J013058M01, full insert sequence NA coding protein psRNATarget
AK062242.1
ncRNA:21   GACC-AUGGAUGUCCAUGGUAC   1
  *|||-|||||||||||||||||
targets:940   AUGGAUACCUACAGGUACCAUG   961

2.0 Oryza sativa Japonica Group cDNA clone:001-047-E10, full insert sequence NA coding protein psRNATarget
XM_015770849.1
ncRNA:21   GACC-AUGGAUGUCCAUGGUAC   1
  *|||-|||||||||||||||||
targets:959   AUGGAUACCUACAGGUACCAUG   980

2.0 PREDICTED: Oryza sativa Japonica Group pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial (LOC4330673), mRNA pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial(LOC4330673) coding protein psRNATarget
CT830041.1
ncRNA:21   GACC-AUGGAUGUCCAUGGUAC   1
  **||-|||||||||||||||||
targets:924   AGGGAUACCUACAGGUACCAUG   945

2.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA043P09, full insert sequence NA coding protein psRNATarget