ncRNA ID | osa-miRf10147-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - CAUGGUACCUGUAGGUACCAG - NA |
Stem-loop(if miRNA) |
   A -GU      U  A                 U   -CACCUG  -      GUUUAA ACU G   CUGGUA CC AUAGGUAUCAUGUUUGG ACU       AC AUGUGG      G ||| |   |||||| || ||||||||||||||||| |||       || |||||| UGA C   GACCAU GG UGUCCAUGGUACAGACU UGA       UG UACACC      C    A AAU      -  A                 U   UACAUCA  A      AUUGUC |
Stem-loop sequence | ACUAGGUCUGGUAUCCAAUAGGUAUCAUGUUUGGUACUCACCUGACAUGUGGGUUUAAGCCUGUUACCACAUAGUACUACAUAGUUUCAGACAUGGUACCUGUAGGUACCAGUAACAAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK098950.1 |
|
2.0 | Oryza sativa Japonica Group cDNA clone:J013058M01, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK062242.1 |
|
2.0 | Oryza sativa Japonica Group cDNA clone:001-047-E10, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015770849.1 |
|
2.0 | PREDICTED: Oryza sativa Japonica Group pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial (LOC4330673), mRNA | pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial(LOC4330673) | coding protein | psRNATarget | |||||||||
CT830041.1 |
|
2.0 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA043P09, full insert sequence | NA | coding protein | psRNATarget |