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BaseInfo

ncRNA ID novel_zma_miR5497
Species Zea mays
Class miRNA
Genome position Chr7:171390515-171390588 [-]
Reference genome RefGen_v4
Source SRR2638137;SRR2647221
Length 24
Mature sequence(if miRNA) 51 - AUCCGUUUCUUUUUAUUUGUCGCU - 74
Stem-loop(if miRNA) --A                               CAA
   UCCGUUUCUUUUUAUUUGUCGCUGGAUAGUG   A
   |||||||||||||||||||||||||||||||
   AGGCAAAGAAAAAUAAACAGCGACCUAUCAC   A
GAG                               AUU
Stem-loop sequence AUCCGUUUCUUUUUAUUUGUCGCUGGAUAGUGCAAAAUUACACUAUCCAGCGACAAAUAAAAAGAAACGGAGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI408618.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:58   AGCGACAAAUAAAAAGAAACGGAG   81

1.0 Sequence 6743 from Patent EP2074227 NA coding protein psRNATarget
LQ242145.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:58   AGCGACAAAUAAAAAGAAACGGAG   81

1.0 Sequence 8140 from Patent EP2985353 NA coding protein psRNATarget
JB169406.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:58   AGCGACAAAUAAAAAGAAACGGAG   81

1.0 Sequence 7070 from Patent EP2559767 NA coding protein psRNATarget
LQ240748.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:58   AGCGACAAAUAAAAAGAAACGGAG   81

1.0 Sequence 6743 from Patent EP2985353 NA coding protein psRNATarget
HI410015.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:58   AGCGACAAAUAAAAAGAAACGGAG   81

1.0 Sequence 8140 from Patent EP2074227 NA coding protein psRNATarget
HI408945.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:58   AGCGACAAAUAAAAAGAAACGGAG   81

1.0 Sequence 7070 from Patent EP2074227 NA coding protein psRNATarget
LQ241075.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:58   AGCGACAAAUAAAAAGAAACGGAG   81

1.0 Sequence 7070 from Patent EP2985353 NA coding protein psRNATarget
JB170476.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:58   AGCGACAAAUAAAAAGAAACGGAG   81

1.0 Sequence 8140 from Patent EP2559767 NA coding protein psRNATarget
HI409961.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:58   AGCGACAAAUAAAAAGAAACGGAG   81

1.0 Sequence 8086 from Patent EP2074227 NA coding protein psRNATarget
JB170422.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:58   AGCGACAAAUAAAAAGAAACGGAG   81

1.0 Sequence 8086 from Patent EP2559767 NA coding protein psRNATarget
JB169079.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:58   AGCGACAAAUAAAAAGAAACGGAG   81

1.0 Sequence 6743 from Patent EP2559767 NA coding protein psRNATarget
LQ242091.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:58   AGCGACAAAUAAAAAGAAACGGAG   81

1.0 Sequence 8086 from Patent EP2985353 NA coding protein psRNATarget
HI403401.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:65   AGCGACAAAUAAAAAGAAACGGAG   88

1.0 Sequence 1526 from Patent EP2074227 NA coding protein psRNATarget
LQ235531.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:65   AGCGACAAAUAAAAAGAAACGGAG   88

1.0 Sequence 1526 from Patent EP2985353 NA coding protein psRNATarget
JB163862.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:65   AGCGACAAAUAAAAAGAAACGGAG   88

1.0 Sequence 1526 from Patent EP2559767 NA coding protein psRNATarget
EZ061437.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:222   AGCGACAAAUAAAAAGAAACGGAG   245

1.0 TSA: Zea mays contig62559, mRNA sequence NA coding protein psRNATarget
EU964901.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:551   AGCGACAAAUAAAAAGAAACGGAG   574

1.0 Zea mays clone 282450 mRNA sequence NA coding protein psRNATarget
EU974849.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:623   AGCGACAAAUAAAAAGAAACGGAG   646

1.0 Zea mays clone 459794 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
NM_001151882.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:623   AGCGACAAAUAAAAAGAAACGGAG   646

1.0 Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA NA coding protein psRNATarget
BT060817.2
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:284   AGCGACAAAUAAAAAGAAACGGAG   307

1.0 Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds NA coding protein psRNATarget
XM_008671993.2
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:1220   AGCGACAAAUAAAAAGAAACGGAG   1243

1.0 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA NA coding protein psRNATarget
NM_001156655.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:1342   AGCGACAAAUAAAAAGAAACGGAG   1365

1.0 Zea mays wax synthase (LOC100283756), mRNA NA coding protein psRNATarget
EU965844.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:1342   AGCGACAAAUAAAAAGAAACGGAG   1365

1.0 Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds NA coding protein psRNATarget
XM_008647346.2
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:195   AGCGACAAAUAAAAAGAAACGGAG   218

1.0 PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA NA coding protein psRNATarget
XM_008651544.2
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:1409   AGCGACAAAUAAAAAGAAACGGAG   1432

1.0 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008671992.2
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:1326   AGCGACAAAUAAAAAGAAACGGAG   1349

1.0 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA NA coding protein psRNATarget
BT043433.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:1399   AGCGACAAAUAAAAAGAAACGGAG   1422

1.0 Zea mays full-length cDNA clone ZM_BFc0188B19 mRNA, complete cds NA coding protein psRNATarget
XM_008677073.2
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:1581   AGCGACAAAUAAAAAGAAACGGAG   1604

1.0 PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA NA coding protein psRNATarget
NM_001148943.2
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:1597   AGCGACAAAUAAAAAGAAACGGAG   1620

1.0 Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA NA coding protein psRNATarget
NM_001196908.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:808   AGCGACAAAUAAAAAGAAACGGAA   831

1.0 Zea mays uncharacterized LOC100502430 (LOC100502430), mRNA NA coding protein psRNATarget
BT088136.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:808   AGCGACAAAUAAAAAGAAACGGAA   831

1.0 Zea mays full-length cDNA clone ZM_BFc0030P23 mRNA, complete cds NA coding protein psRNATarget
EU957018.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:2054   AGCGACAAAUAAAAAGAAACGGAG   2077

1.0 Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds NA coding protein psRNATarget
XM_008651543.2
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:2550   AGCGACAAAUAAAAAGAAACGGAG   2573

1.0 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546615.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:2850   AGCGACAAAUAAAAAGAAACGGAG   2873

1.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546614.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:2867   AGCGACAAAUAAAAAGAAACGGAG   2890

1.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546612.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:2973   AGCGACAAAUAAAAAGAAACGGAG   2996

1.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546613.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||||||*
targets:3752   AGCGACAAAUAAAAAGAAACGGAG   3775

1.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA NA coding protein psRNATarget
HI409699.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||=||||||||||||||*
targets:58   AGCGACAAGUAAAAAGAAACGGAG   81

2.0 Sequence 7824 from Patent EP2074227 NA coding protein psRNATarget
LQ241829.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||=||||||||||||||*
targets:58   AGCGACAAGUAAAAAGAAACGGAG   81

2.0 Sequence 7824 from Patent EP2985353 NA coding protein psRNATarget
JB170160.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||=||||||||||||||*
targets:58   AGCGACAAGUAAAAAGAAACGGAG   81

2.0 Sequence 7824 from Patent EP2559767 NA coding protein psRNATarget
HI403279.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||=|||*
targets:65   AGCGACAAAUAAAAAGAAAUGGAG   88

2.5 Sequence 1404 from Patent EP2074227 NA coding protein psRNATarget
LQ235409.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||=|||*
targets:65   AGCGACAAAUAAAAAGAAAUGGAG   88

2.5 Sequence 1404 from Patent EP2985353 NA coding protein psRNATarget
JB163740.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||=|||*
targets:65   AGCGACAAAUAAAAAGAAAUGGAG   88

2.5 Sequence 1404 from Patent EP2559767 NA coding protein psRNATarget
XM_020546173.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  *||||||||||||||||||||||*
targets:1517   UGCGACAAAUAAAAAGAAACGGAG   1540

1.0 PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA NA coding protein psRNATarget
HI403339.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:43   AGCGACUAAUAAAAAGAAACGGAG   66

2.0 Sequence 1464 from Patent EP2074227 NA coding protein psRNATarget
JB163800.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:43   AGCGACUAAUAAAAAGAAACGGAG   66

2.0 Sequence 1464 from Patent EP2559767 NA coding protein psRNATarget
LQ235469.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:43   AGCGACUAAUAAAAAGAAACGGAG   66

2.0 Sequence 1464 from Patent EP2985353 NA coding protein psRNATarget
HI403374.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:49   AGCGACUAAUAAAAAGAAACGGAG   72

2.0 Sequence 1499 from Patent EP2074227 NA coding protein psRNATarget
LQ235497.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:49   AGCGACUAAUAAAAAGAAACGGAG   72

2.0 Sequence 1492 from Patent EP2985353 NA coding protein psRNATarget
HI403367.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:49   AGCGACUAAUAAAAAGAAACGGAG   72

2.0 Sequence 1492 from Patent EP2074227 NA coding protein psRNATarget
JB163828.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:49   AGCGACUAAUAAAAAGAAACGGAG   72

2.0 Sequence 1492 from Patent EP2559767 NA coding protein psRNATarget
HI403313.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:49   AGCGACUAAUAAAAAGAAACGGAG   72

2.0 Sequence 1438 from Patent EP2074227 NA coding protein psRNATarget
LQ235515.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:49   AGCGACUAAUAAAAAGAAACGGAG   72

2.0 Sequence 1510 from Patent EP2985353 NA coding protein psRNATarget
LQ235504.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:49   AGCGACUAAUAAAAAGAAACGGAG   72

2.0 Sequence 1499 from Patent EP2985353 NA coding protein psRNATarget
JB163835.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:49   AGCGACUAAUAAAAAGAAACGGAG   72

2.0 Sequence 1499 from Patent EP2559767 NA coding protein psRNATarget
JB163774.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:49   AGCGACUAAUAAAAAGAAACGGAG   72

2.0 Sequence 1438 from Patent EP2559767 NA coding protein psRNATarget
HI403385.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:49   AGCGACUAAUAAAAAGAAACGGAG   72

2.0 Sequence 1510 from Patent EP2074227 NA coding protein psRNATarget
JB163846.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:49   AGCGACUAAUAAAAAGAAACGGAG   72

2.0 Sequence 1510 from Patent EP2559767 NA coding protein psRNATarget
LQ235443.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:49   AGCGACUAAUAAAAAGAAACGGAG   72

2.0 Sequence 1438 from Patent EP2985353 NA coding protein psRNATarget
HI409551.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*||||||||||||||*
targets:50   AGCGACAACUAAAAAGAAACGGAG   73

2.0 Sequence 7676 from Patent EP2074227 NA coding protein psRNATarget
JB170012.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*||||||||||||||*
targets:50   AGCGACAACUAAAAAGAAACGGAG   73

2.0 Sequence 7676 from Patent EP2559767 NA coding protein psRNATarget
LQ241681.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*||||||||||||||*
targets:50   AGCGACAACUAAAAAGAAACGGAG   73

2.0 Sequence 7676 from Patent EP2985353 NA coding protein psRNATarget
JB166291.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:54   AGCGACUAAUAAAAAGAAACGGAG   77

2.0 Sequence 3955 from Patent EP2559767 NA coding protein psRNATarget
LQ237960.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:54   AGCGACUAAUAAAAAGAAACGGAG   77

2.0 Sequence 3955 from Patent EP2985353 NA coding protein psRNATarget
HI405830.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:54   AGCGACUAAUAAAAAGAAACGGAG   77

2.0 Sequence 3955 from Patent EP2074227 NA coding protein psRNATarget
HI403365.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:35   AGCGACUAAUAAAAAGAAACGGAG   58

2.0 Sequence 1490 from Patent EP2074227 NA coding protein psRNATarget
HI403365.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:61   AGCGACUAAUAAAAAGAAACGGAG   84

2.0 Sequence 1490 from Patent EP2074227 NA coding protein psRNATarget
LQ235495.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:35   AGCGACUAAUAAAAAGAAACGGAG   58

2.0 Sequence 1490 from Patent EP2985353 NA coding protein psRNATarget
LQ235495.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:61   AGCGACUAAUAAAAAGAAACGGAG   84

2.0 Sequence 1490 from Patent EP2985353 NA coding protein psRNATarget
JB163826.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:35   AGCGACUAAUAAAAAGAAACGGAG   58

2.0 Sequence 1490 from Patent EP2559767 NA coding protein psRNATarget
JB163826.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:61   AGCGACUAAUAAAAAGAAACGGAG   84

2.0 Sequence 1490 from Patent EP2559767 NA coding protein psRNATarget
JB169695.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*||||||||||||||*
targets:57   AGCGACAACUAAAAAGAAACGGAG   80

2.0 Sequence 7359 from Patent EP2559767 NA coding protein psRNATarget
HI409234.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*||||||||||||||*
targets:57   AGCGACAACUAAAAAGAAACGGAG   80

2.0 Sequence 7359 from Patent EP2074227 NA coding protein psRNATarget
LQ241364.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*||||||||||||||*
targets:57   AGCGACAACUAAAAAGAAACGGAG   80

2.0 Sequence 7359 from Patent EP2985353 NA coding protein psRNATarget
HI408570.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||||||||||||*||||*
targets:58   AGCGACAAAUAAAAAGAACCGGAG   81

2.5 Sequence 6695 from Patent EP2074227 NA coding protein psRNATarget
JB169789.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||||||||*||||||||*
targets:58   AGCGACAAAUAAAACGAAACGGAG   81

2.5 Sequence 7453 from Patent EP2559767 NA coding protein psRNATarget
JB169031.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||||||||||||*||||*
targets:58   AGCGACAAAUAAAAAGAACCGGAG   81

2.5 Sequence 6695 from Patent EP2559767 NA coding protein psRNATarget
HI409616.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||*|||*
targets:58   AGCGACAAAUAAAAAGAAAGGGAG   81

2.5 Sequence 7741 from Patent EP2074227 NA coding protein psRNATarget
LQ241746.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||*|||*
targets:58   AGCGACAAAUAAAAAGAAAGGGAG   81

2.5 Sequence 7741 from Patent EP2985353 NA coding protein psRNATarget
JB170657.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||||||||*||||||||*
targets:58   AGCGACAAAUAAAACGAAACGGAG   81

2.5 Sequence 8321 from Patent EP2559767 NA coding protein psRNATarget
JB170077.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||||||||||||||||*|||*
targets:58   AGCGACAAAUAAAAAGAAAGGGAG   81

2.5 Sequence 7741 from Patent EP2559767 NA coding protein psRNATarget
LQ241458.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||||||||*||||||||*
targets:58   AGCGACAAAUAAAACGAAACGGAG   81

2.5 Sequence 7453 from Patent EP2985353 NA coding protein psRNATarget
LQ240840.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||||||||*||||||||*
targets:58   AGCGACAAAUAAAACGAAACGGAG   81

2.5 Sequence 6835 from Patent EP2985353 NA coding protein psRNATarget
HI408710.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||||||||*||||||||*
targets:58   AGCGACAAAUAAAACGAAACGGAG   81

2.5 Sequence 6835 from Patent EP2074227 NA coding protein psRNATarget
HI409328.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||||||||*||||||||*
targets:58   AGCGACAAAUAAAACGAAACGGAG   81

2.5 Sequence 7453 from Patent EP2074227 NA coding protein psRNATarget
JB169171.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||||||||*||||||||*
targets:58   AGCGACAAAUAAAACGAAACGGAG   81

2.5 Sequence 6835 from Patent EP2559767 NA coding protein psRNATarget
LQ242326.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||||||||*||||||||*
targets:58   AGCGACAAAUAAAACGAAACGGAG   81

2.5 Sequence 8321 from Patent EP2985353 NA coding protein psRNATarget
LQ240700.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||||||||||||*||||*
targets:58   AGCGACAAAUAAAAAGAACCGGAG   81

2.5 Sequence 6695 from Patent EP2985353 NA coding protein psRNATarget
HI410196.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||||||||*||||||||*
targets:58   AGCGACAAAUAAAACGAAACGGAG   81

2.5 Sequence 8321 from Patent EP2074227 NA coding protein psRNATarget
LQ239454.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*||||||||||||||*
targets:60   AGCGACAACUAAAAAGAAACGGAG   83

2.0 Sequence 5449 from Patent EP2985353 NA coding protein psRNATarget
JB167785.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*||||||||||||||*
targets:60   AGCGACAACUAAAAAGAAACGGAG   83

2.0 Sequence 5449 from Patent EP2559767 NA coding protein psRNATarget
HI407324.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*||||||||||||||*
targets:60   AGCGACAACUAAAAAGAAACGGAG   83

2.0 Sequence 5449 from Patent EP2074227 NA coding protein psRNATarget
HI407230.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*||||||||||||||*
targets:60   AGCGACAACUAAAAAGAAACGGAG   83

2.0 Sequence 5355 from Patent EP2074227 NA coding protein psRNATarget
LQ239360.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*||||||||||||||*
targets:60   AGCGACAACUAAAAAGAAACGGAG   83

2.0 Sequence 5355 from Patent EP2985353 NA coding protein psRNATarget
JB167691.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*||||||||||||||*
targets:60   AGCGACAACUAAAAAGAAACGGAG   83

2.0 Sequence 5355 from Patent EP2559767 NA coding protein psRNATarget
LQ235499.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |*|||||||||||||||||||||*
targets:65   AACGACAAAUAAAAAGAAACGGAG   88

1.0 Sequence 1494 from Patent EP2985353 NA coding protein psRNATarget
HI403369.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |*|||||||||||||||||||||*
targets:65   AACGACAAAUAAAAAGAAACGGAG   88

1.0 Sequence 1494 from Patent EP2074227 NA coding protein psRNATarget
JB163830.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |*|||||||||||||||||||||*
targets:65   AACGACAAAUAAAAAGAAACGGAG   88

1.0 Sequence 1494 from Patent EP2559767 NA coding protein psRNATarget
EZ089411.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*||||||||||||||*
targets:361   AGCGACAACUAAAAAGAAACGGAA   384

2.0 TSA: Zea mays contig25057, mRNA sequence NA coding protein psRNATarget
XM_008664463.2
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:147   AGCGACUAAUAAAAAGAAACGGAG   170

2.0 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X3, mRNA NA coding protein psRNATarget
BT062468.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*||||||||||||||*
targets:625   AGCGACAACUAAAAAGAAACGGAG   648

2.0 Zea mays full-length cDNA clone ZM_BFb0302A02 mRNA, complete cds NA coding protein psRNATarget
BT070166.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:818   AGCGACUAAUAAAAAGAAACGGAG   841

2.0 Zea mays full-length cDNA clone ZM_BFc0141C23 mRNA, complete cds NA coding protein psRNATarget
NM_001328133.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:818   AGCGACUAAUAAAAAGAAACGGAG   841

2.0 Zea mays Methionyl-tRNA synthetase (LOC100384454), mRNA NA coding protein psRNATarget
XM_008656230.2
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*||||||||||||||*
targets:41   AGCGACAACUAAAAAGAAACGGAG   64

2.0 PREDICTED: Zea mays phosphatidylinositol transfer protein 2 (LOC103634487), mRNA NA coding protein psRNATarget
EU971616.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*||||||||||||||*
targets:1216   AGCGACAACUAAAAAGAAACGGAG   1239

2.0 Zea mays clone 368130 rieske domain containing protein mRNA, complete cds NA coding protein psRNATarget
EU970288.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:1377   AGCGACUAAUAAAAAGAAACGGAG   1400

2.0 Zea mays clone 343094 metal tolerance protein C3 mRNA, complete cds NA coding protein psRNATarget
NM_001156357.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*||||||||||||||*
targets:1569   AGCGACAACUAAAAAGAAACGGAG   1592

2.0 Zea mays Acetylornithine deacetylase (pco121857a), mRNA NA coding protein psRNATarget
EU964807.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*||||||||||||||*
targets:1569   AGCGACAACUAAAAAGAAACGGAG   1592

2.0 Zea mays clone 281665 acetylornithine deacetylase mRNA, complete cds NA coding protein psRNATarget
XM_008674191.2
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*||||||||||||||*
targets:1205   AGCGACAACUAAAAAGAAACGGAG   1228

2.0 PREDICTED: Zea mays putative protein S-acyltransferase 16 (LOC100273154), transcript variant X1, mRNA NA coding protein psRNATarget
BT024153.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:235   AGCGACUAAUAAAAAGAAACGGAG   258

2.0 Zea mays clone EL01N0438E01 mRNA sequence NA coding protein psRNATarget
XM_008669400.2
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:1654   AGCGACUAAUAAAAAGAAACGGAG   1677

2.0 PREDICTED: Zea mays Pentatricopeptide repeat-containing protein PNM1 mitochondrial (LOC100274849), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008656936.2
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:218   AGCGACUAAUAAAAAGAAACGGAG   241

2.0 PREDICTED: Zea mays putative HLH DNA-binding domain superfamily protein (LOC100381500), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008675770.2
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:1862   AGCGACUAAUAAAAAGAAACGGAG   1885

2.0 PREDICTED: Zea mays pectinesterase-like (LOC103650113), mRNA NA coding protein psRNATarget
XM_020542418.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:2029   AGCGACUAAUAAAAAGAAACGGAG   2052

2.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008658752.2
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:2096   AGCGACUAAUAAAAAGAAACGGAG   2119

2.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020551485.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*||||||||||||||*
targets:2582   AGCGACAACUAAAAAGAAACGGAG   2605

2.0 PREDICTED: Zea mays putative cytochrome P450 superfamily protein (LOC100279319), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020544250.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |*|||||||||||||||||||||*
targets:2489   AACGACAAAUAAAAAGAAACGGAG   2512

1.0 PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008664460.2
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||*||||||||||||||||*
targets:167   AGCGACUAAUAAAAAGAAACGGAG   190

2.0 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008667486.2
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*||||||||||||||*
targets:1386   AGCGACAACUAAAAAGAAACGGAG   1409

2.0 PREDICTED: Zea mays mannan endo-1,4-beta-mannosidase 3 (LOC103644285), transcript variant X1, mRNA NA coding protein psRNATarget
LQ241813.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||=||*||||||||||||||*
targets:50   AGCGAUAACUAAAAAGAAACGGAG   73

3.0 Sequence 7808 from Patent EP2985353 NA coding protein psRNATarget
JB170144.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||=||*||||||||||||||*
targets:50   AGCGAUAACUAAAAAGAAACGGAG   73

3.0 Sequence 7808 from Patent EP2559767 NA coding protein psRNATarget
HI409683.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||||=||*||||||||||||||*
targets:50   AGCGAUAACUAAAAAGAAACGGAG   73

3.0 Sequence 7808 from Patent EP2074227 NA coding protein psRNATarget
NM_001143050.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||=|||*||||||||||||||||*
targets:1138   AGUGACUAAUAAAAAGAAACGGAG   1161

2.0 Zea mays uncharacterized LOC100216637 (LOC100216637), mRNA NA coding protein psRNATarget
BT037092.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||=|||*||||||||||||||||*
targets:1138   AGUGACUAAUAAAAAGAAACGGAG   1161

2.0 Zea mays full-length cDNA clone ZM_BFb0154F16 mRNA, complete cds NA coding protein psRNATarget
HI406357.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |*||||||*|||||||||||||||
targets:52   AACGACAACUAAAAAGAAACGGAU   75

1.0 Sequence 4482 from Patent EP2074227 NA coding protein psRNATarget
JB166818.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |*||||||*|||||||||||||||
targets:52   AACGACAACUAAAAAGAAACGGAU   75

1.0 Sequence 4482 from Patent EP2559767 NA coding protein psRNATarget
LQ238487.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |*||||||*|||||||||||||||
targets:52   AACGACAACUAAAAAGAAACGGAU   75

1.0 Sequence 4482 from Patent EP2985353 NA coding protein psRNATarget
XM_020544903.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||=|||*||||||||||||||||*
targets:3195   AGUGACUAAUAAAAAGAAACGGAG   3218

2.0 PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020544902.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||=|||*||||||||||||||||*
targets:3204   AGUGACUAAUAAAAAGAAACGGAG   3227

2.0 PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X1, mRNA NA coding protein psRNATarget
LQ237988.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*|||||*|||||||||
targets:62   AGCGACAACUAAAACGAAACGGAU   85

2.5 Sequence 3983 from Patent EP2985353 NA coding protein psRNATarget
HI405858.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*|||||*|||||||||
targets:62   AGCGACAACUAAAACGAAACGGAU   85

2.5 Sequence 3983 from Patent EP2074227 NA coding protein psRNATarget
JB166319.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*|||||*|||||||||
targets:62   AGCGACAACUAAAACGAAACGGAU   85

2.5 Sequence 3983 from Patent EP2559767 NA coding protein psRNATarget
XM_020541158.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*|||||*|||||||||
targets:1081   AGCGACAACUAAAACGAAACGGAU   1104

2.5 PREDICTED: Zea mays acid phosphatase 1 (LOC103633566), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020541157.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*|||||*|||||||||
targets:1083   AGCGACAACUAAAACGAAACGGAU   1106

2.5 PREDICTED: Zea mays acid phosphatase 1 (LOC103633566), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008655254.2
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*|||||*|||||||||
targets:1102   AGCGACAACUAAAACGAAACGGAU   1125

2.5 PREDICTED: Zea mays acid phosphatase 1 (LOC103633566), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001305845.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||||||*|||||*|||||||||
targets:2274   AGCGACAACUAAAACGAAACGGAU   2297

2.5 Zea mays uncharacterized LOC542022 (LOC542022), mRNA NA coding protein psRNATarget
EU971439.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||*||||*|||||||||||||||
targets:2167   AGCUACAACUAAAAAGAAACGGAU   2190

1.0 Zea mays clone 364738 cyclin-like F-box mRNA, complete cds NA coding protein psRNATarget
NM_001158152.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||*||||*|||||||||||||||
targets:2167   AGCUACAACUAAAAAGAAACGGAU   2190

1.0 Zea mays cyclin-like F-box (LOC100285258), mRNA NA coding protein psRNATarget
EU973473.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  *|||||*||||||||||||||||*
targets:703   CGCGACUAAUAAAAAGAAACGGAG   726

2.0 Zea mays clone 399411 mRNA sequence NA coding protein psRNATarget
LQ235503.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||*||*||||||||||||||||*
targets:49   AGCUACUAAUAAAAAGAAACGGAG   72

2.0 Sequence 1498 from Patent EP2985353 NA coding protein psRNATarget
JB163834.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||*||*||||||||||||||||*
targets:49   AGCUACUAAUAAAAAGAAACGGAG   72

2.0 Sequence 1498 from Patent EP2559767 NA coding protein psRNATarget
HI403373.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  |||*||*||||||||||||||||*
targets:49   AGCUACUAAUAAAAAGAAACGGAG   72

2.0 Sequence 1498 from Patent EP2074227 NA coding protein psRNATarget
JB166581.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||*|||*||||||||||||||*
targets:50   AGCGCCAACUAAAAAGAAACGGAG   73

2.0 Sequence 4245 from Patent EP2559767 NA coding protein psRNATarget
HI406120.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||*|||*||||||||||||||*
targets:50   AGCGCCAACUAAAAAGAAACGGAG   73

2.0 Sequence 4245 from Patent EP2074227 NA coding protein psRNATarget
LQ238250.1
ncRNA:24   UCGCUGUUUAUUUUUCUUUGCCUA   1
  ||||*|||*||||||||||||||*
targets:50   AGCGCCAACUAAAAAGAAACGGAG   73

2.0 Sequence 4245 from Patent EP2985353 NA coding protein psRNATarget
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