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BaseInfo

ncRNA ID	novel_zma_miR5495
Species	Zea mays
Class	miRNA
Genome position	Chr7:170564575-170564625 [+]
Reference genome	RefGen_v4
Source	SRR2638137;SRR2647221;SRR2647343;SRR2647385;SRR2647386;SRR2647387;SRR2647388;SRR2647389;SRR2647390;SRR2647391;SRR2647467
Length	24
Mature sequence(if miRNA)	28 - GACUAGGAGGGGAUUUAAACCUCU - 51
Stem-loop(if miRNA)	---  A                   A    GG UUUAAAUCUCCUCCUAGUC A    || ||||||||||||||||||| A    CC AAAUUUAGGGGAGGAUCAG A UCU  -                   U
Stem-loop sequence	GGAUUUAAAUCUCCUCCUAGUCAAAAUGACUAGGAGGGGAUUUAAACCUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU953211.1	ncRNA:24   UCUCCAAAUUUAGGGGAGGAUCAG   1   |||||||||||||||||=|||||= targets:1757   AGAGGUUUAAAUCCCCUUCUAGUU   1780 Target Full Sequence	2.5	Zea mays clone 1390646 mRNA sequence	NA	coding protein	psRNATarget
NM_001319738.1	ncRNA:24   UCUCCAAAUUUAGGGGAGGAUCAG   1   |||||||||||||||||=|||||= targets:1783   AGAGGUUUAAAUCCCCUUCUAGUU   1806 Target Full Sequence	2.5	Zea mays cytochrome P450 81D11-like (LOC103640488), mRNA	NA	coding protein	psRNATarget
EU957986.1	ncRNA:24   UCUCCAAAUUUAGGGGAGGAUCAG   1   |||||||||||||||||=|||||= targets:1784   AGAGGUUUAAAUCCCCUUCUAGUU   1807 Target Full Sequence	2.5	Zea mays clone 1639355 cytochrome P450 CYP81N5 mRNA, complete cds	NA	coding protein	psRNATarget
EZ095217.1	ncRNA:24   UCUCCAAAUUUAGGGGAGGAUCAG   1   ||=|||||||||||||*||||||| targets:73   AGGGGUUUAAAUCCCCGCCUAGUC   96 Target Full Sequence	1.5	TSA: Zea mays contig30870, mRNA sequence	NA	coding protein	psRNATarget
XM_008670947.1	ncRNA:24   UCUCCAAAUUUAGGGGAGGAUCAG   1   ||=||*|||||||||=|||||||| targets:604   AGGGGAUUAAAUCCCUUCCUAGUC   627 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103646219 (LOC103646219), mRNA	NA	coding protein	psRNATarget
XM_008656925.2	ncRNA:24   UCUCCAAAUUUAGGGGAGGAUCAG   1   ||||*||||||||||=|||||||= targets:79   AGAGAUUUAAAUCCCUUCCUAGUU   102 Target Full Sequence	2.5	PREDICTED: Zea mays OSJNBa0059D20.8-like protein (LOC100304325), transcript variant X3, mRNA	NA	coding protein	psRNATarget