ncRNA ID | novel_zma_miR5489 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:55386098-55386265 [-] |
Reference genome | RefGen_v4 |
Source | SRR2638137 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAAAUCUAACUUCCUAGAGGAGGU - 24 |
Stem-loop(if miRNA) |
-CAG  -G                - G -     UG     CA  UG   CC       C  -  GGA   CG             G     CC  UAGGAAGUUAGAUUUU C U UUGAC  GUCAA  GC  AAA  UAACUUC UA GA   GGC  UAGGAAGUUAGCU C     ||  |||||||||||||||| | | |||||  |||||  ||  |||  ||||||| || ||   |||  |||||||||||||     GG  AUCCUUCAAUCUAAAG G A AACUG  CAGUU  UG  UUU  AUUGAAG AU CU   CCG  AUCCUUCAAUCGA C UGGA  AG                U G C     GU     --  GU   CU       U  G  -GA   AG             C |
Stem-loop sequence | CAGCCGUAGGAAGUUAGAUUUUCGUUUGACUGGUCAACAGCUGAAACCUAACUUCCUAGAGGAGGCCGUAGGAAGUUAGCUGCCCAGCUAACUUCCUAGAGCCAGUCGUAUGAAGUUAUCUUUUGGUUUGACUGGUCAACAGGUGAAAUCUAACUUCCUAGAGGAGGU |