ncRNA ID | novel_zma_miR5479 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:146240169-146240250 [-] |
Reference genome | RefGen_v4 |
Source | SRR2638137 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CACGGUCCACAAUUAGUUAUGUGU - 24 |
Stem-loop(if miRNA) |
--     U      A   GU         CCA  A  -  UGC   ACAUA CUAAUU UGG  CGUGCCGUG   GC CG UG   C   ||||| |||||| |||  |||||||||   || || ||   UGUAU GAUUAA ACC  GCACGGCAC   CG GC AC   C UG     U      C   UG         --C  -  U  UGA |
Stem-loop sequence | ACAUAUCUAAUUAUGGGUCGUGCCGUGCCAGCACGUGUGCCCAGUCAUCGGCCCACGGCACGGUCCACAAUUAGUUAUGUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020547541.1 |
|
1.5 | PREDICTED: Zea mays uncharacterized LOC100273682 (LOC100273682), transcript variant X1, mRNA | NA | coding protein | psRNATarget |