Search result

BaseInfo

ncRNA ID novel_zma_miR5474
Species Zea mays
Class miRNA
Genome position Chr5:155947625-155947697 [+]
Reference genome RefGen_v4
Source SRR2638137
Length 23
Mature sequence(if miRNA) 1 - GUGGCUCUCGGCAAAGCGCCGUU - 23
Stem-loop(if miRNA) ---G               C  C UUA         CCA
    UGGCUCUCGGCAAAG GC G   GCGGCCGUC   C
    ||||||||||||||| || |   |||||||||
    ACCGAGAGCCGUUUC UG C   UGCCGGCAG   A
GUCA               -  A ---         UCG
Stem-loop sequence GUGGCUCUCGGCAAAGCGCCGUUAGCGGCCGUCCCACAGCUGACGGCCGUCAGUCUUUGCCGAGAGCCAACUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI406967.1
ncRNA:23   UUGCCGCGAAACGGCUCUCGGUG   1
  |||||=*|||||||||||||||=
targets:1   AACGGUCCUUUGCCGAGAGCCAU   23

3.0 Sequence 5092 from Patent EP2074227 NA coding protein psRNATarget
LQ239097.1
ncRNA:23   UUGCCGCGAAACGGCUCUCGGUG   1
  |||||=*|||||||||||||||=
targets:1   AACGGUCCUUUGCCGAGAGCCAU   23

3.0 Sequence 5092 from Patent EP2985353 NA coding protein psRNATarget
JB167428.1
ncRNA:23   UUGCCGCGAAACGGCUCUCGGUG   1
  |||||=*|||||||||||||||=
targets:1   AACGGUCCUUUGCCGAGAGCCAU   23

3.0 Sequence 5092 from Patent EP2559767 NA coding protein psRNATarget