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BaseInfo

ncRNA ID	novel_zma_miR5463
Species	Zea mays
Class	miRNA
Genome position	Chr5:12263432-12263503 [-]
Reference genome	RefGen_v4
Source	SRR2638137
Length	23
Mature sequence(if miRNA)	50 - UGGAUUUAAUCCGGAUAUGGAUU - 72
Stem-loop(if miRNA)	--            G A     -        AAUUC   UGGAUUUAAUCC G UAUGG AUUGGGUG     A   |||||||||||| | ||||| ||||||||     U   ACCUAAAUUAGG U GUACC UAACCCAC     A CU            G G     C        ACUCU
Stem-loop sequence	UGGAUUUAAUCCGGAUAUGGAUUGGGUGAAUUCAUAUCUCACACCCAAUCCCAUGGUGGGAUUAAAUCCAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020543935.1	ncRNA:23   UUAGGUAUAGGCCUAAUUUAGGU   1   ||||||||||||||||||||||| targets:157   AAUCCAUAUCCGGAUUAAAUCCA   179 Target Full Sequence	0.0	PREDICTED: Zea mays pentatricopeptide repeat-containing protein At5g39710 (LOC103638071), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020543936.1	ncRNA:23   UUAGGUAUAGGCCUAAUUUAGGU   1   ||||||||||||||||||||||| targets:157   AAUCCAUAUCCGGAUUAAAUCCA   179 Target Full Sequence	0.0	PREDICTED: Zea mays pentatricopeptide repeat-containing protein At5g39710 (LOC103638071), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020543937.1	ncRNA:23   UUAGGUAUAGGCCUAAUUUAGGU   1   ||||||||||||||||||||||| targets:157   AAUCCAUAUCCGGAUUAAAUCCA   179 Target Full Sequence	0.0	PREDICTED: Zea mays pentatricopeptide repeat-containing protein At5g39710 (LOC103638071), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020543938.1	ncRNA:23   UUAGGUAUAGGCCUAAUUUAGGU   1   ||||||||||||||||||||||| targets:157   AAUCCAUAUCCGGAUUAAAUCCA   179 Target Full Sequence	0.0	PREDICTED: Zea mays pentatricopeptide repeat-containing protein At5g39710 (LOC103638071), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_008661803.2	ncRNA:23   UUAGGUAUAGGCCUAAUUUAGGU   1   ||||||||*|||||||||||||| targets:1362   AAUCCAUACCCGGAUUAAAUCCA   1384 Target Full Sequence	1.0	PREDICTED: Zea mays protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 (LOC103639026), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU948994.1	ncRNA:23   UUAGGUAUAGGCCUAAUUUAGGU   1   ||||||||*|||||||||||||| targets:798   AAUCCAUACCCGGAUUAAAUCCA   820 Target Full Sequence	1.0	Zea mays clone 393087 mRNA sequence	NA	coding protein	psRNATarget
XM_008671212.2	ncRNA:23   UUAGGUAUAGGCCUAAUUUAGGU   1   ||||||||*|||||||||||=|| targets:89   AAUCCAUACCCGGAUUAAAUUCA   111 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103646487 (LOC103646487), mRNA	NA	coding protein	psRNATarget