ncRNA ID | novel_zma_miR5462 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:15348494-15348575 [-] |
Reference genome | RefGen_v4 |
Source | SRR2638137 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CACGGUCCACAAUUAGUUAUGUGU - 24 |
Stem-loop(if miRNA) |
--     U      A              CCAACAC   UGC   ACAUA CUAAUU UGGGCCGUGCCGUG       GUG   C   ||||| |||||| ||||||||||||||       |||   UGUAU GAUUAA ACCUGGCACGGCAC       UAC   C UG     U      C              --CCGAC   UGA |
Stem-loop sequence | ACAUAUCUAAUUAUGGGCCGUGCCGUGCCAACACGUGUGCCCAGUCAUCAGCCCACGGCACGGUCCACAAUUAGUUAUGUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020547541.1 |
|
1.5 | PREDICTED: Zea mays uncharacterized LOC100273682 (LOC100273682), transcript variant X1, mRNA | NA | coding protein | psRNATarget |