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BaseInfo

ncRNA ID	novel_zma_miR5445
Species	Zea mays
Class	miRNA
Genome position	Chr5:207847488-207847561 [+]
Reference genome	RefGen_v4
Source	SRR2638137
Length	24
Mature sequence(if miRNA)	1 - UUCCGUUUCUUUUUAUUAGUCGCU - 24
Stem-loop(if miRNA)	--                                  A   UUCCGUUUCUUUUUAUUAGUCGCUGGAUAGUGCA A   ||||||||||||||||||||||||||||||||||   GAGGCAAAGAAAAAUAAUCAGCGACCUAUCACGU A GG                                  U
Stem-loop sequence	UUCCGUUUCUUUUUAUUAGUCGCUGGAUAGUGCAAAAUUGCACUAUCCAGCGACUAAUAAAAAGAAACGGAGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235469.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:43   AGCGACUAAUAAAAAGAAACGGAG   66 Target Full Sequence	1.0	Sequence 1464 from Patent EP2985353	NA	coding protein	psRNATarget
HI403339.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:43   AGCGACUAAUAAAAAGAAACGGAG   66 Target Full Sequence	1.0	Sequence 1464 from Patent EP2074227	NA	coding protein	psRNATarget
JB163800.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:43   AGCGACUAAUAAAAAGAAACGGAG   66 Target Full Sequence	1.0	Sequence 1464 from Patent EP2559767	NA	coding protein	psRNATarget
JB163828.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:49   AGCGACUAAUAAAAAGAAACGGAG   72 Target Full Sequence	1.0	Sequence 1492 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235497.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:49   AGCGACUAAUAAAAAGAAACGGAG   72 Target Full Sequence	1.0	Sequence 1492 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235515.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:49   AGCGACUAAUAAAAAGAAACGGAG   72 Target Full Sequence	1.0	Sequence 1510 from Patent EP2985353	NA	coding protein	psRNATarget
HI403313.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:49   AGCGACUAAUAAAAAGAAACGGAG   72 Target Full Sequence	1.0	Sequence 1438 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235504.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:49   AGCGACUAAUAAAAAGAAACGGAG   72 Target Full Sequence	1.0	Sequence 1499 from Patent EP2985353	NA	coding protein	psRNATarget
HI403374.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:49   AGCGACUAAUAAAAAGAAACGGAG   72 Target Full Sequence	1.0	Sequence 1499 from Patent EP2074227	NA	coding protein	psRNATarget
JB163846.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:49   AGCGACUAAUAAAAAGAAACGGAG   72 Target Full Sequence	1.0	Sequence 1510 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235443.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:49   AGCGACUAAUAAAAAGAAACGGAG   72 Target Full Sequence	1.0	Sequence 1438 from Patent EP2985353	NA	coding protein	psRNATarget
JB163835.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:49   AGCGACUAAUAAAAAGAAACGGAG   72 Target Full Sequence	1.0	Sequence 1499 from Patent EP2559767	NA	coding protein	psRNATarget
JB163774.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:49   AGCGACUAAUAAAAAGAAACGGAG   72 Target Full Sequence	1.0	Sequence 1438 from Patent EP2559767	NA	coding protein	psRNATarget
HI403367.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:49   AGCGACUAAUAAAAAGAAACGGAG   72 Target Full Sequence	1.0	Sequence 1492 from Patent EP2074227	NA	coding protein	psRNATarget
HI403385.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:49   AGCGACUAAUAAAAAGAAACGGAG   72 Target Full Sequence	1.0	Sequence 1510 from Patent EP2074227	NA	coding protein	psRNATarget
HI405830.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:54   AGCGACUAAUAAAAAGAAACGGAG   77 Target Full Sequence	1.0	Sequence 3955 from Patent EP2074227	NA	coding protein	psRNATarget
LQ237960.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:54   AGCGACUAAUAAAAAGAAACGGAG   77 Target Full Sequence	1.0	Sequence 3955 from Patent EP2985353	NA	coding protein	psRNATarget
JB166291.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:54   AGCGACUAAUAAAAAGAAACGGAG   77 Target Full Sequence	1.0	Sequence 3955 from Patent EP2559767	NA	coding protein	psRNATarget
HI403365.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:35   AGCGACUAAUAAAAAGAAACGGAG   58 Target Full Sequence	1.0	Sequence 1490 from Patent EP2074227	NA	coding protein	psRNATarget
HI403365.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:61   AGCGACUAAUAAAAAGAAACGGAG   84 Target Full Sequence	1.0	Sequence 1490 from Patent EP2074227	NA	coding protein	psRNATarget
JB163826.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:35   AGCGACUAAUAAAAAGAAACGGAG   58 Target Full Sequence	1.0	Sequence 1490 from Patent EP2559767	NA	coding protein	psRNATarget
JB163826.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:61   AGCGACUAAUAAAAAGAAACGGAG   84 Target Full Sequence	1.0	Sequence 1490 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235495.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:35   AGCGACUAAUAAAAAGAAACGGAG   58 Target Full Sequence	1.0	Sequence 1490 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235495.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:61   AGCGACUAAUAAAAAGAAACGGAG   84 Target Full Sequence	1.0	Sequence 1490 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008664463.2	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:147   AGCGACUAAUAAAAAGAAACGGAG   170 Target Full Sequence	1.0	PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X3, mRNA	NA	coding protein	psRNATarget
BT070166.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:818   AGCGACUAAUAAAAAGAAACGGAG   841 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0141C23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001328133.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:818   AGCGACUAAUAAAAAGAAACGGAG   841 Target Full Sequence	1.0	Zea mays Methionyl-tRNA synthetase (LOC100384454), mRNA	NA	coding protein	psRNATarget
EU970288.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:1377   AGCGACUAAUAAAAAGAAACGGAG   1400 Target Full Sequence	1.0	Zea mays clone 343094 metal tolerance protein C3 mRNA, complete cds	NA	coding protein	psRNATarget
BT024153.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:235   AGCGACUAAUAAAAAGAAACGGAG   258 Target Full Sequence	1.0	Zea mays clone EL01N0438E01 mRNA sequence	NA	coding protein	psRNATarget
XM_008669400.2	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:1654   AGCGACUAAUAAAAAGAAACGGAG   1677 Target Full Sequence	1.0	PREDICTED: Zea mays Pentatricopeptide repeat-containing protein PNM1 mitochondrial (LOC100274849), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008656936.2	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:218   AGCGACUAAUAAAAAGAAACGGAG   241 Target Full Sequence	1.0	PREDICTED: Zea mays putative HLH DNA-binding domain superfamily protein (LOC100381500), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008675770.2	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:1862   AGCGACUAAUAAAAAGAAACGGAG   1885 Target Full Sequence	1.0	PREDICTED: Zea mays pectinesterase-like (LOC103650113), mRNA	NA	coding protein	psRNATarget
XM_020542418.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:2029   AGCGACUAAUAAAAAGAAACGGAG   2052 Target Full Sequence	1.0	PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008658752.2	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:2096   AGCGACUAAUAAAAAGAAACGGAG   2119 Target Full Sequence	1.0	PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008664460.2	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||||||||||= targets:167   AGCGACUAAUAAAAAGAAACGGAG   190 Target Full Sequence	1.0	PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X1, mRNA	NA	coding protein	psRNATarget
LQ237972.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||||||||||||||||||== targets:51   AGCGACUAAUAAAAAGAAACGGGG   74 Target Full Sequence	2.5	Sequence 3967 from Patent EP2985353	NA	coding protein	psRNATarget
JB166303.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||||||||||||||||||== targets:51   AGCGACUAAUAAAAAGAAACGGGG   74 Target Full Sequence	2.5	Sequence 3967 from Patent EP2559767	NA	coding protein	psRNATarget
HI405842.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||||||||||||||||||== targets:51   AGCGACUAAUAAAAAGAAACGGGG   74 Target Full Sequence	2.5	Sequence 3967 from Patent EP2074227	NA	coding protein	psRNATarget
BT037092.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||=||||||||||||||||||||= targets:1138   AGUGACUAAUAAAAAGAAACGGAG   1161 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0154F16 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001143050.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||=||||||||||||||||||||= targets:1138   AGUGACUAAUAAAAAGAAACGGAG   1161 Target Full Sequence	1.0	Zea mays uncharacterized LOC100216637 (LOC100216637), mRNA	NA	coding protein	psRNATarget
XM_020544903.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||=||||||||||||||||||||= targets:3195   AGUGACUAAUAAAAAGAAACGGAG   3218 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020544902.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||=||||||||||||||||||||= targets:3204   AGUGACUAAUAAAAAGAAACGGAG   3227 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU973473.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   *||||||||||||||||||||||= targets:703   CGCGACUAAUAAAAAGAAACGGAG   726 Target Full Sequence	1.0	Zea mays clone 399411 mRNA sequence	NA	coding protein	psRNATarget
NM_001196908.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||| targets:808   AGCGACAAAUAAAAAGAAACGGAA   831 Target Full Sequence	1.0	Zea mays uncharacterized LOC100502430 (LOC100502430), mRNA	NA	coding protein	psRNATarget
BT088136.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||| targets:808   AGCGACAAAUAAAAAGAAACGGAA   831 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0030P23 mRNA, complete cds	NA	coding protein	psRNATarget
LQ235503.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||*|||||||||||||||||||= targets:49   AGCUACUAAUAAAAAGAAACGGAG   72 Target Full Sequence	1.0	Sequence 1498 from Patent EP2985353	NA	coding protein	psRNATarget
HI403373.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||*|||||||||||||||||||= targets:49   AGCUACUAAUAAAAAGAAACGGAG   72 Target Full Sequence	1.0	Sequence 1498 from Patent EP2074227	NA	coding protein	psRNATarget
JB163834.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||*|||||||||||||||||||= targets:49   AGCUACUAAUAAAAAGAAACGGAG   72 Target Full Sequence	1.0	Sequence 1498 from Patent EP2559767	NA	coding protein	psRNATarget
JB166289.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||*|||||||= targets:54   AGCGACUAAUAAAAAAAAACGGAG   77 Target Full Sequence	2.5	Sequence 3953 from Patent EP2559767	NA	coding protein	psRNATarget
LQ237958.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||*|||||||= targets:54   AGCGACUAAUAAAAAAAAACGGAG   77 Target Full Sequence	2.5	Sequence 3953 from Patent EP2985353	NA	coding protein	psRNATarget
HI405828.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||*|||||||= targets:54   AGCGACUAAUAAAAAAAAACGGAG   77 Target Full Sequence	2.5	Sequence 3953 from Patent EP2074227	NA	coding protein	psRNATarget
JB170422.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:58   AGCGACAAAUAAAAAGAAACGGAG   81 Target Full Sequence	2.0	Sequence 8086 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242145.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:58   AGCGACAAAUAAAAAGAAACGGAG   81 Target Full Sequence	2.0	Sequence 8140 from Patent EP2985353	NA	coding protein	psRNATarget
HI409961.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:58   AGCGACAAAUAAAAAGAAACGGAG   81 Target Full Sequence	2.0	Sequence 8086 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242091.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:58   AGCGACAAAUAAAAAGAAACGGAG   81 Target Full Sequence	2.0	Sequence 8086 from Patent EP2985353	NA	coding protein	psRNATarget
JB170476.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:58   AGCGACAAAUAAAAAGAAACGGAG   81 Target Full Sequence	2.0	Sequence 8140 from Patent EP2559767	NA	coding protein	psRNATarget
HI408945.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:58   AGCGACAAAUAAAAAGAAACGGAG   81 Target Full Sequence	2.0	Sequence 7070 from Patent EP2074227	NA	coding protein	psRNATarget
JB169406.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:58   AGCGACAAAUAAAAAGAAACGGAG   81 Target Full Sequence	2.0	Sequence 7070 from Patent EP2559767	NA	coding protein	psRNATarget
HI410015.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:58   AGCGACAAAUAAAAAGAAACGGAG   81 Target Full Sequence	2.0	Sequence 8140 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241075.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:58   AGCGACAAAUAAAAAGAAACGGAG   81 Target Full Sequence	2.0	Sequence 7070 from Patent EP2985353	NA	coding protein	psRNATarget
LQ240748.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:58   AGCGACAAAUAAAAAGAAACGGAG   81 Target Full Sequence	2.0	Sequence 6743 from Patent EP2985353	NA	coding protein	psRNATarget
HI408618.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:58   AGCGACAAAUAAAAAGAAACGGAG   81 Target Full Sequence	2.0	Sequence 6743 from Patent EP2074227	NA	coding protein	psRNATarget
JB169079.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:58   AGCGACAAAUAAAAAGAAACGGAG   81 Target Full Sequence	2.0	Sequence 6743 from Patent EP2559767	NA	coding protein	psRNATarget
LQ237990.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||*|||||||= targets:59   AGCGACUAAUAAAAAAAAACGGAG   82 Target Full Sequence	2.5	Sequence 3985 from Patent EP2985353	NA	coding protein	psRNATarget
JB166321.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||*|||||||= targets:59   AGCGACUAAUAAAAAAAAACGGAG   82 Target Full Sequence	2.5	Sequence 3985 from Patent EP2559767	NA	coding protein	psRNATarget
HI405860.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |||||||||||||||*|||||||= targets:59   AGCGACUAAUAAAAAAAAACGGAG   82 Target Full Sequence	2.5	Sequence 3985 from Patent EP2074227	NA	coding protein	psRNATarget
JB169084.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |*|||||||||||||||||||||= targets:63   AUCGACUAAUAAAAAGAAACGGAG   86 Target Full Sequence	1.0	Sequence 6748 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240753.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |*|||||||||||||||||||||= targets:63   AUCGACUAAUAAAAAGAAACGGAG   86 Target Full Sequence	1.0	Sequence 6748 from Patent EP2985353	NA	coding protein	psRNATarget
HI408623.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |*|||||||||||||||||||||= targets:63   AUCGACUAAUAAAAAGAAACGGAG   86 Target Full Sequence	1.0	Sequence 6748 from Patent EP2074227	NA	coding protein	psRNATarget
HI403401.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:65   AGCGACAAAUAAAAAGAAACGGAG   88 Target Full Sequence	2.0	Sequence 1526 from Patent EP2074227	NA	coding protein	psRNATarget
JB163862.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:65   AGCGACAAAUAAAAAGAAACGGAG   88 Target Full Sequence	2.0	Sequence 1526 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235531.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:65   AGCGACAAAUAAAAAGAAACGGAG   88 Target Full Sequence	2.0	Sequence 1526 from Patent EP2985353	NA	coding protein	psRNATarget
EZ061437.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:222   AGCGACAAAUAAAAAGAAACGGAG   245 Target Full Sequence	2.0	TSA: Zea mays contig62559, mRNA sequence	NA	coding protein	psRNATarget
EU964901.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:551   AGCGACAAAUAAAAAGAAACGGAG   574 Target Full Sequence	2.0	Zea mays clone 282450 mRNA sequence	NA	coding protein	psRNATarget
EU974849.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:623   AGCGACAAAUAAAAAGAAACGGAG   646 Target Full Sequence	2.0	Zea mays clone 459794 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001151882.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:623   AGCGACAAAUAAAAAGAAACGGAG   646 Target Full Sequence	2.0	Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA	NA	coding protein	psRNATarget
BT060817.2	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:284   AGCGACAAAUAAAAAGAAACGGAG   307 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds	NA	coding protein	psRNATarget
EZ061772.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||*||||||||||||||||||= targets:238   AGCGCCUAAUAAAAAGAAACGGAG   261 Target Full Sequence	1.0	TSA: Zea mays contig62894, mRNA sequence	NA	coding protein	psRNATarget
XM_008671993.2	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:1220   AGCGACAAAUAAAAAGAAACGGAG   1243 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EU965844.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:1342   AGCGACAAAUAAAAAGAAACGGAG   1365 Target Full Sequence	2.0	Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001156655.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:1342   AGCGACAAAUAAAAAGAAACGGAG   1365 Target Full Sequence	2.0	Zea mays wax synthase (LOC100283756), mRNA	NA	coding protein	psRNATarget
XM_008647346.2	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:195   AGCGACAAAUAAAAAGAAACGGAG   218 Target Full Sequence	2.0	PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA	NA	coding protein	psRNATarget
XM_008651544.2	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:1409   AGCGACAAAUAAAAAGAAACGGAG   1432 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008671992.2	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:1326   AGCGACAAAUAAAAAGAAACGGAG   1349 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT043433.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:1399   AGCGACAAAUAAAAAGAAACGGAG   1422 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0188B19 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008677073.2	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:1581   AGCGACAAAUAAAAAGAAACGGAG   1604 Target Full Sequence	2.0	PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA	NA	coding protein	psRNATarget
NM_001148943.2	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:1597   AGCGACAAAUAAAAAGAAACGGAG   1620 Target Full Sequence	2.0	Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA	NA	coding protein	psRNATarget
EU957018.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:2054   AGCGACAAAUAAAAAGAAACGGAG   2077 Target Full Sequence	2.0	Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008651543.2	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:2550   AGCGACAAAUAAAAAGAAACGGAG   2573 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546615.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:2850   AGCGACAAAUAAAAAGAAACGGAG   2873 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020546614.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:2867   AGCGACAAAUAAAAAGAAACGGAG   2890 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020546612.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:2973   AGCGACAAAUAAAAAGAAACGGAG   2996 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546613.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*||||||||||||||||= targets:3752   AGCGACAAAUAAAAAGAAACGGAG   3775 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA	NA	coding protein	psRNATarget
LQ241829.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|=||||||||||||||= targets:58   AGCGACAAGUAAAAAGAAACGGAG   81 Target Full Sequence	3.0	Sequence 7824 from Patent EP2985353	NA	coding protein	psRNATarget
JB170160.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|=||||||||||||||= targets:58   AGCGACAAGUAAAAAGAAACGGAG   81 Target Full Sequence	3.0	Sequence 7824 from Patent EP2559767	NA	coding protein	psRNATarget
HI409699.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|=||||||||||||||= targets:58   AGCGACAAGUAAAAAGAAACGGAG   81 Target Full Sequence	3.0	Sequence 7824 from Patent EP2074227	NA	coding protein	psRNATarget
XM_020546173.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   *|||||*||||||||||||||||= targets:1517   UGCGACAAAUAAAAAGAAACGGAG   1540 Target Full Sequence	2.0	PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA	NA	coding protein	psRNATarget
EZ089411.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|*||||||||||||||| targets:361   AGCGACAACUAAAAAGAAACGGAA   384 Target Full Sequence	2.0	TSA: Zea mays contig25057, mRNA sequence	NA	coding protein	psRNATarget
JB170012.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|*||||||||||||||= targets:50   AGCGACAACUAAAAAGAAACGGAG   73 Target Full Sequence	3.0	Sequence 7676 from Patent EP2559767	NA	coding protein	psRNATarget
HI409551.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|*||||||||||||||= targets:50   AGCGACAACUAAAAAGAAACGGAG   73 Target Full Sequence	3.0	Sequence 7676 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241681.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|*||||||||||||||= targets:50   AGCGACAACUAAAAAGAAACGGAG   73 Target Full Sequence	3.0	Sequence 7676 from Patent EP2985353	NA	coding protein	psRNATarget
HI409234.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|*||||||||||||||= targets:57   AGCGACAACUAAAAAGAAACGGAG   80 Target Full Sequence	3.0	Sequence 7359 from Patent EP2074227	NA	coding protein	psRNATarget
JB169695.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|*||||||||||||||= targets:57   AGCGACAACUAAAAAGAAACGGAG   80 Target Full Sequence	3.0	Sequence 7359 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241364.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|*||||||||||||||= targets:57   AGCGACAACUAAAAAGAAACGGAG   80 Target Full Sequence	3.0	Sequence 7359 from Patent EP2985353	NA	coding protein	psRNATarget
HI407324.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|*||||||||||||||= targets:60   AGCGACAACUAAAAAGAAACGGAG   83 Target Full Sequence	3.0	Sequence 5449 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239454.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|*||||||||||||||= targets:60   AGCGACAACUAAAAAGAAACGGAG   83 Target Full Sequence	3.0	Sequence 5449 from Patent EP2985353	NA	coding protein	psRNATarget
JB167785.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|*||||||||||||||= targets:60   AGCGACAACUAAAAAGAAACGGAG   83 Target Full Sequence	3.0	Sequence 5449 from Patent EP2559767	NA	coding protein	psRNATarget
HI407230.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|*||||||||||||||= targets:60   AGCGACAACUAAAAAGAAACGGAG   83 Target Full Sequence	3.0	Sequence 5355 from Patent EP2074227	NA	coding protein	psRNATarget
JB167691.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|*||||||||||||||= targets:60   AGCGACAACUAAAAAGAAACGGAG   83 Target Full Sequence	3.0	Sequence 5355 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239360.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|*||||||||||||||= targets:60   AGCGACAACUAAAAAGAAACGGAG   83 Target Full Sequence	3.0	Sequence 5355 from Patent EP2985353	NA	coding protein	psRNATarget
JB163830.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |*||||*||||||||||||||||= targets:65   AACGACAAAUAAAAAGAAACGGAG   88 Target Full Sequence	2.0	Sequence 1494 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235499.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |*||||*||||||||||||||||= targets:65   AACGACAAAUAAAAAGAAACGGAG   88 Target Full Sequence	2.0	Sequence 1494 from Patent EP2985353	NA	coding protein	psRNATarget
HI403369.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |*||||*||||||||||||||||= targets:65   AACGACAAAUAAAAAGAAACGGAG   88 Target Full Sequence	2.0	Sequence 1494 from Patent EP2074227	NA	coding protein	psRNATarget
BT062468.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|*||||||||||||||= targets:625   AGCGACAACUAAAAAGAAACGGAG   648 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0302A02 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008656230.2	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|*||||||||||||||= targets:41   AGCGACAACUAAAAAGAAACGGAG   64 Target Full Sequence	3.0	PREDICTED: Zea mays phosphatidylinositol transfer protein 2 (LOC103634487), mRNA	NA	coding protein	psRNATarget
EU971616.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|*||||||||||||||= targets:1216   AGCGACAACUAAAAAGAAACGGAG   1239 Target Full Sequence	3.0	Zea mays clone 368130 rieske domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
EU964807.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|*||||||||||||||= targets:1569   AGCGACAACUAAAAAGAAACGGAG   1592 Target Full Sequence	3.0	Zea mays clone 281665 acetylornithine deacetylase mRNA, complete cds	NA	coding protein	psRNATarget
NM_001156357.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|*||||||||||||||= targets:1569   AGCGACAACUAAAAAGAAACGGAG   1592 Target Full Sequence	3.0	Zea mays Acetylornithine deacetylase (pco121857a), mRNA	NA	coding protein	psRNATarget
XM_008674191.2	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|*||||||||||||||= targets:1205   AGCGACAACUAAAAAGAAACGGAG   1228 Target Full Sequence	3.0	PREDICTED: Zea mays putative protein S-acyltransferase 16 (LOC100273154), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020551485.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|*||||||||||||||= targets:2582   AGCGACAACUAAAAAGAAACGGAG   2605 Target Full Sequence	3.0	PREDICTED: Zea mays putative cytochrome P450 superfamily protein (LOC100279319), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020544250.1	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   |*||||*||||||||||||||||= targets:2489   AACGACAAAUAAAAAGAAACGGAG   2512 Target Full Sequence	2.0	PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008667486.2	ncRNA:24   UCGCUGAUUAUUUUUCUUUGCCUU   1   ||||||*|*||||||||||||||= targets:1386   AGCGACAACUAAAAAGAAACGGAG   1409 Target Full Sequence	3.0	PREDICTED: Zea mays mannan endo-1,4-beta-mannosidase 3 (LOC103644285), transcript variant X1, mRNA	NA	coding protein	psRNATarget