ncRNA ID | novel_zma_miR5441 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:39035962-39036125 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287165 |
Length | 24 |
Mature sequence(if miRNA) | 141 - UGUCAACCAUGACUCGUUUGGACC - 164 |
Stem-loop(if miRNA) |
--                               C       AA        C       C            CAUG  - GG   UCCAAACGGGUCGUGGUUGACAUAUGGACCC ACAUGUC  CAUGUGUA CUCUUUU UUUCUCUUUUCU    UC C  U   ||||||||||||||||||||||||||||||| |||||||  |||||||| ||||||| ||||||||||||    || |  G   AGGUUUGCUCAGUACCAACUGUAUACCUGGG UGUACGG  GUACACAU GAGAAAG AGAGAGAAAAGA    AG G  A CC                               A       CC        A       U            UCCA  A AA |
Stem-loop sequence | UCCAAACGGGUCGUGGUUGACAUAUGGACCCCACAUGUCAACAUGUGUACCUCUUUUCUUUCUCUUUUCUCAUGUCCGGUGAAAGAGAACCUAGAAAAGAGAGAUGAAAGAGAUACACAUGCCGGCAUGUAGGGUCCAUAUGUCAACCAUGACUCGUUUGGACC |