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BaseInfo

ncRNA ID novel_zma_miR5441
Species Zea mays
Class miRNA
Genome position Chr3:39035962-39036125 [+]
Reference genome RefGen_v4
Source SRR2287165
Length 24
Mature sequence(if miRNA) 141 - UGUCAACCAUGACUCGUUUGGACC - 164
Stem-loop(if miRNA) --                               C       AA        C       C            CAUG  - GG
  UCCAAACGGGUCGUGGUUGACAUAUGGACCC ACAUGUC  CAUGUGUA CUCUUUU UUUCUCUUUUCU    UC C  U
  ||||||||||||||||||||||||||||||| |||||||  |||||||| ||||||| ||||||||||||    || |  G
  AGGUUUGCUCAGUACCAACUGUAUACCUGGG UGUACGG  GUACACAU GAGAAAG AGAGAGAAAAGA    AG G  A
CC                               A       CC        A       U            UCCA  A AA
Stem-loop sequence UCCAAACGGGUCGUGGUUGACAUAUGGACCCCACAUGUCAACAUGUGUACCUCUUUUCUUUCUCUUUUCUCAUGUCCGGUGAAAGAGAACCUAGAAAAGAGAGAUGAAAGAGAUACACAUGCCGGCAUGUAGGGUCCAUAUGUCAACCAUGACUCGUUUGGACC