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BaseInfo

ncRNA ID novel_zma_miR5423
Species Zea mays
Class miRNA
Genome position Chr2:60011596-60011773 [+]
Reference genome RefGen_v4
Source SRR2287165;SRR5451003;SRR2089704
Length 24
Mature sequence(if miRNA) 1 - UUCCACUGACGGUUAUCUUAACAC - 24
Stem-loop(if miRNA) --        A                                U                   AA  UAAGA                U
  UUCCACUG CGGUUAUCUUAACACAACCGCCAGUGGAAAUA GAUGUUUCCACUGGCGGUU  GU     UAACCGCCAGUGGAAA C
  |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||  ||     ||||||||||||||||
  AAGGUGAC GCCAAUAGAAUUGUGUUGGCGGUCACCUUUAU CUACAAAGGUGACCGCCAA  CA     GUUGGCGGUCACUUUU A
UA        C                                C                   CA  UUGUG                A
Stem-loop sequence UUCCACUGACGGUUAUCUUAACACAACCGCCAGUGGAAAUAUGAUGUUUCCACUGGCGGUUAAGUUAAGAUAACCGCCAGUGGAAAUCAAUUUUCACUGGCGGUUGGUGUUACACAACCGCCAGUGGAAACAUCCUAUUUCCACUGGCGGUUGUGUUAAGAUAACCGCCAGUGGAAAU