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BaseInfo

ncRNA ID novel_zma_miR5422
Species Zea mays
Class miRNA
Genome position Chr4:78466540-78466688 [-]
Reference genome RefGen_v4
Source SRR1618883
Length 21
Mature sequence(if miRNA) 1 - UUUAGUCUUCAGCUGUAUAAU - 21
Stem-loop(if miRNA) ----    CUGA               A       GC      A          C       U  UC    GAUGA
    UACA    UGAGGACUAAACGAU AGACGAA  UAUUAA UCUAAUUAGU CAUGAUU GC  AUGU     U
    ||||    ||||||||||||||| |||||||  |||||| |||||||||| ||||||| ||  ||||     A
    AUGU    ACUUCUGAUUUGCUA UCUGUUU  AUAAUU AGAUUAAUUA GUACUAA UG  UAUA     C
UAAU    --CG               C       AA      C          A       U  UU    AAUAA
Stem-loop sequence UACACUGAUGAGGACUAAACGAUAAGACGAAGCUAUUAAAUCUAAUUAGUCCAUGAUUUGCUCAUGUGAUGAUACAAUAAAUAUUUGUUAAUCAUGAAUUAAUUAGACUUAAUAAAUUUGUCUCAUCGUUUAGUCUUCAGCUGUAUAAU