ncRNA ID | novel_zma_miR5413 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:31754886-31754974 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287165 |
Length | 24 |
Mature sequence(if miRNA) | 66 - AGGGGACGCUUUAGAGGAUCUUGU - 89 |
Stem-loop(if miRNA) |
--A      G  U      A       -  -   CA        CU    GGGGAC CU UAGAGG UCUUGUU GG AGG  UAGGGGAC  G    |||||| || |||||| ||||||| || |||  ||||||||    UUCCUG GA AUUUCC AGGACAG CC UUU  AUCCUCUG  A UUG      -  C      G       G  A   AC        CC |
Stem-loop sequence | AGGGGACGCUUUAGAGGAUCUUGUUGGAGGCAUAGGGGACCUGACCGUCUCCUACAUUUACCGGACAGGAGCCUUUACAGGUCCUUGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008660954.2 |
|
1.0 | PREDICTED: Zea mays Anaphase-promoting complex subunit 4 (LOC103637954), transcript variant X3, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008660953.2 |
|
1.0 | PREDICTED: Zea mays Anaphase-promoting complex subunit 4 (LOC103637954), transcript variant X1, mRNA | NA | coding protein | psRNATarget |