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BaseInfo

ncRNA ID	osa-miRf10138-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - AGUCCCGGUUAGUAACACCAACCGG - NA
Stem-loop(if miRNA)	U             U      C             A     CUUUACUCCC  UUGAUUCCAUGU  UUAGUCCCGGUUG UGUUAC AACCGGGACUAAA AUCAU          GG            C  ||||||||||||| |||||| ||||||||||||| |||||          ||            A  AAUCAGGGCCAAC ACAAUG UUGGCCCUGAUUU UAGUA          CC            G A             C      A             C     --------UC  GGGACUGUGUCG
Stem-loop sequence	UUUAGUCCCGGUUGUUGUUACCAACCGGGACUAAAAAUCAUCUUUACUCCCGGUUGAUUCCAUGUCAGGCUGUGUCAGGGCCCUAUGAUCUUUAGUCCCGGUUAGUAACACCAACCGGGACUAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI404518.1	ncRNA:25   GGCCAACCACAAUGAUUGGCCCUGA   1   ||||||||||*|||*|||||||||| targets:54   CCGGUUGGUGCUACCAACCGGGACU   78 Target Full Sequence	2.5	Sequence 2643 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236648.1	ncRNA:25   GGCCAACCACAAUGAUUGGCCCUGA   1   ||||||||||*|||*|||||||||| targets:54   CCGGUUGGUGCUACCAACCGGGACU   78 Target Full Sequence	2.5	Sequence 2643 from Patent EP2985353	NA	coding protein	psRNATarget
JB164979.1	ncRNA:25   GGCCAACCACAAUGAUUGGCCCUGA   1   ||||||||||*|||*|||||||||| targets:54   CCGGUUGGUGCUACCAACCGGGACU   78 Target Full Sequence	2.5	Sequence 2643 from Patent EP2559767	NA	coding protein	psRNATarget
XM_015758314.1	ncRNA:25   GGCCAACCACAAUGAUUGGCCCUGA   1   ||||||*|||||||*|||||||||| targets:917   CCGGUUUGUGUUACCAACCGGGACU   941 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278346 (LOC107278346), transcript variant X1, mRNA	uncharacterized LOC107278346(LOC107278346)	coding protein	psRNATarget
AK289098.1	ncRNA:25   GGCCAACCACAAUGAUUGGCCCUGA   1   |||||||||*||||*|||||||||| targets:115   CCGGUUGGUUUUACCAACCGGGACU   139 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:25   GGCCAACCACAAUGAUUGGCCCUGA   1   ||||||*|||||||*|||||||||| targets:2392   CCGGUUAGUGUUACCAACCGGGACU   2416 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK288405.1	ncRNA:25   GGCCAACCACAAUGAUUGGCCCUGA   1   ||*|||||||||||*|||||||||| targets:2399   CCCGUUGGUGUUACCAACCGGGACU   2423 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence	NA	coding protein	psRNATarget
AK119916.1	ncRNA:25   GGCCAACCACAAUGAUUGGCCCUGA   1   =||||||*|||||||||||||*||| targets:375   UCGGUUGAUGUUACUAACCGGUACU   399 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-183-F10, full insert sequence	NA	coding protein	psRNATarget
XM_015755256.1	ncRNA:25   GGCCAACCACAAUGAUUGGCCCUGA   1   ||****||||||||*|||||||||| targets:62   CCAUCCGGUGUUACCAACCGGGACU   86 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346665 (LOC4346665), transcript variant X2, mRNA	uncharacterized LOC4346665(LOC4346665)	coding protein	psRNATarget
AK288496.1	ncRNA:25   GGCCAACCACAAUGAUUGGCCCUGA   1   *|*|****||||||||||||||||| targets:653   ACUGAGACUGUUACUAACCGGGACU   677 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090040O05, full insert sequence	NA	coding protein	psRNATarget