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BaseInfo

ncRNA ID novel_zma_miR5409
Species Zea mays
Class miRNA
Genome position Chr2:92044827-92045010 [-]
Reference genome RefGen_v4
Source SRR2287165
Length 24
Mature sequence(if miRNA) 161 - GGUGAUGAGUAAGAUAAGACGGUU - 184
Stem-loop(if miRNA) --      G  U  GA              G  ---AUCC U   UAAU    AA      ---          ACA   -   G  -A       UAU
  GGUGAU AG AA  UAAGACGGUUUUUG AG       G CUU    AAAG  GUGUUU   UGAGACAGUU   UCA UAA AA  UGUCUUA   U
  |||||| || ||  |||||||||||||| ||       | |||    ||||  ||||||   ||||||||||   ||| ||| ||  |||||||
  UCAUUG UU UU  AUUCUGUUAAGAAC UU       C GAG    UUUC  UAUAAA   AUUCUGUUAA   AGU AUU UU  ACAGGAU   A
UA      G  -  AG              G  ACAAUUA U   ---U    CA      UAA          --A   U   G  AG       UUA
Stem-loop sequence GGUGAUGAGUAAGAUAAGACGGUUUUUGGAGAUCCGUCUUUAAUAAAGAAGUGUUUUGAGACAGUUACAUCAUAAGAAAUGUCUUAUAUUAAUUUAGGACAGAUUGUUAUUGAAAAUUGUCUUAAAUAAAUAUACCUUUUGAGUCAUUAACAUUGCAAGAAUUGUCUUAGAUUUUGGUUACUAU