ncRNA ID | novel_zma_miR5409 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:92044827-92045010 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287165 |
Length | 24 |
Mature sequence(if miRNA) | 161 - GGUGAUGAGUAAGAUAAGACGGUU - 184 |
Stem-loop(if miRNA) |
--      G  U  GA              G  ---AUCC U   UAAU    AA      ---          ACA   -   G  -A       UAU   GGUGAU AG AA  UAAGACGGUUUUUG AG       G CUU    AAAG  GUGUUU   UGAGACAGUU   UCA UAA AA  UGUCUUA   U   |||||| || ||  |||||||||||||| ||       | |||    ||||  ||||||   ||||||||||   ||| ||| ||  |||||||   UCAUUG UU UU  AUUCUGUUAAGAAC UU       C GAG    UUUC  UAUAAA   AUUCUGUUAA   AGU AUU UU  ACAGGAU   A UA      G  -  AG              G  ACAAUUA U   ---U    CA      UAA          --A   U   G  AG       UUA |
Stem-loop sequence | GGUGAUGAGUAAGAUAAGACGGUUUUUGGAGAUCCGUCUUUAAUAAAGAAGUGUUUUGAGACAGUUACAUCAUAAGAAAUGUCUUAUAUUAAUUUAGGACAGAUUGUUAUUGAAAAUUGUCUUAAAUAAAUAUACCUUUUGAGUCAUUAACAUUGCAAGAAUUGUCUUAGAUUUUGGUUACUAU |