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BaseInfo

ncRNA ID novel_zma_miR5403
Species Zea mays
Class miRNA
Genome position Chr4:123455464-123455518 [-]
Reference genome RefGen_v4
Source SRR1618883
Length 24
Mature sequence(if miRNA) 1 - UAUGUGAAUUACUGAUCCUGGCAC - 24
Stem-loop(if miRNA) --    U   G   C         AUC
  GCUA GAU AGU AUUUAUGUA   G
  |||| ||| ||| |||||||||   C
  CGGU CUA UCA UAAGUGUAU   U
CA    C   G   U         GUG
Stem-loop sequence GCUAUGAUGAGUCAUUUAUGUAAUCGCUGUGUAUGUGAAUUACUGAUCCUGGCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT061892.2
ncRNA:24   CACGGUCCUAGUCAUUAAGUGUAU   1
  *|||*|||*|||||||||||||||
targets:43   AUGCAAGGUUCAGUAAUUCACAUA   66

1.0 Zea mays full-length cDNA clone ZM_BFb0194O04 mRNA, complete cds NA coding protein psRNATarget