Search result

BaseInfo

ncRNA ID	novel_zma_miR5399
Species	Zea mays
Class	miRNA
Genome position	Chr2:27532593-27532675 [+]
Reference genome	RefGen_v4
Source	SRR2287165;SRR5451005
Length	24
Mature sequence(if miRNA)	60 - GCCUUAUUUUCGGCGGUUUCUGGC - 83
Stem-loop(if miRNA)	--                    -   AAG   C            CAGGAACCGCCGAAAAUAAG CCU   GCC CUGAAAAUAG   |||||||||||||||||||| |||   ||| |||||||||U   GUCUUUGGCGGCUUUUAUUC GGA   CGG GGCUUUUAUU CG                    C   -AA   C
Stem-loop sequence	CAGGAACCGCCGAAAAUAAGCCUAAGGCCCCUGAAAAUAGUUUAUUUUCGGCGGCAAAGGCCUUAUUUUCGGCGGUUUCUGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI407204.1	ncRNA:24   CGGUCUUUGGCGGCUUUUAUUCCG   1   ||||*||=|||||||||||||||| targets:2   GCCAAAAGCCGCCGAAAAUAAGGC   25 Target Full Sequence	1.0	Sequence 5329 from Patent EP2074227	NA	coding protein	psRNATarget
JB167665.1	ncRNA:24   CGGUCUUUGGCGGCUUUUAUUCCG   1   ||||*||=|||||||||||||||| targets:2   GCCAAAAGCCGCCGAAAAUAAGGC   25 Target Full Sequence	1.0	Sequence 5329 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239334.1	ncRNA:24   CGGUCUUUGGCGGCUUUUAUUCCG   1   ||||*||=|||||||||||||||| targets:2   GCCAAAAGCCGCCGAAAAUAAGGC   25 Target Full Sequence	1.0	Sequence 5329 from Patent EP2985353	NA	coding protein	psRNATarget