ncRNA ID | novel_zma_miR5394 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:200516788-200516880 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287165 |
Length | 24 |
Mature sequence(if miRNA) | 70 - AAAACUGGAGGGGAUUGAAGGGGC - 93 |
Stem-loop(if miRNA) |
--             A   A            C           CAA   AAAACUGGAGGGG UUG AGGGGCUAAAAU CCCUUCUUAUU   A   ||||||||||||| ||| |||||||||||| |||||||||||   UUUUGGCCUCCCC AAC UCCUCGAUUUUA GGGAAGAAUAA   A UC             -   C            A           AUA |
Stem-loop sequence | AAAACUGGAGGGGAUUGAAGGGGCUAAAAUCCCCUUCUUAUUCAAAAAUAAAUAAGAAGGGAAUUUUAGCUCCUCCAACCCCUCCGGUUUUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008654495.2 |
|
1.5 | PREDICTED: Zea mays probable GMP synthase [glutamine-hydrolyzing] (LOC103632764), mRNA | NA | coding protein | psRNATarget |