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BaseInfo

ncRNA ID novel_zma_miR5391
Species Zea mays
Class miRNA
Genome position Chr2:203622604-203622653 [-]
Reference genome RefGen_v4
Source SRR2287165
Length 24
Mature sequence(if miRNA) 1 - UCGCGAGCCUGGAACGAGCCGAGC - 24
Stem-loop(if miRNA) --UG        ---      G    C
    GGCUCGUU   GGCUCG UGAG C
    ||||||||   |||||| ||||
    CCGAGCAA   CCGAGC GCUC G
CGAG        GGU      -    G
Stem-loop sequence UGGGCUCGUUGGCUCGGUGAGCCGGCUCGCGAGCCUGGAACGAGCCGAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU948448.1
ncRNA:24   CGAGCCGAGCAAGGUCCGAGCGCU   1
  |||||||||||||*||||||||||
targets:277   GCUCGGCUCGUUCGAGGCUCGCGA   300

1.5 Zea mays clone 376771 mRNA sequence NA coding protein psRNATarget