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BaseInfo

ncRNA ID	osa-miRf10136-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CAGCAAGUGCAGCUACUGCA - NA
Stem-loop(if miRNA)	U    C          -  A   C      CGUUAG   -CA    AUGC  GA G GCUCGG UGCA UGGCUGCACU GC GCA AGCCAA      CCG   AGUG    AC  G A |||||| |||| |||||||||| || ||| ||||||      |||   ||||    ||  | UGAGCC ACGU AUCGACGUGA CG CGU UCGGUU      GGC   UCAU    UG  C A       C    C          A  A   A      -----A   ACG    -GGU  -A A
Stem-loop sequence	GCUCGGUUGCACUGGCUGCACUGCAGCACAGCCAACGUUAGCCGCAAGUGAUGCACGAGGAAACAGUUGGUACUGCACGGAUUGGCUAUGCAGCAAGUGCAGCUACUGCACCCGAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015779423.1	ncRNA:20   ACGUCAUCGACGUGAACGAC   1   ||||*|=||||||||||||| targets:1422   UGCAUUGGCUGCACUUGCUG   1441 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group probable LRR receptor-like serine/threonine-protein kinase At1g56140 (LOC4336996), partial mRNA	probable LRR receptor-like serine/threonine-protein kinase At1g56140(LOC4336996)	coding protein	psRNATarget
XM_015795453.1	ncRNA:20   ACGUCAUCGACGUGAACGAC   1   ||*||||||||||*|||||| targets:1493   UGAAGUAGCUGCAAUUGCUG   1512 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group disease resistance protein RPM1 (LOC4345108), transcript variant X3, mRNA	disease resistance protein RPM1(LOC4345108)	coding protein	psRNATarget
XM_015795451.1	ncRNA:20   ACGUCAUCGACGUGAACGAC   1   ||*||||||||||*|||||| targets:1487   UGAAGUAGCUGCAAUUGCUG   1506 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group disease resistance protein RPM1 (LOC4345108), transcript variant X1, mRNA	disease resistance protein RPM1(LOC4345108)	coding protein	psRNATarget
XM_015795452.1	ncRNA:20   ACGUCAUCGACGUGAACGAC   1   ||*||||||||||*|||||| targets:1462   UGAAGUAGCUGCAAUUGCUG   1481 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group disease resistance protein RPM1 (LOC4345108), transcript variant X2, mRNA	disease resistance protein RPM1(LOC4345108)	coding protein	psRNATarget
AK100590.1	ncRNA:20   ACGUCAUCGACGUGAACGAC   1   ||*||||||||||*|||||| targets:1446   UGAAGUAGCUGCAAUUGCUG   1465 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023106I20, full insert sequence	NA	coding protein	psRNATarget
AK111411.1	ncRNA:20   ACGUCAUCGACGUGAACGAC   1   *|*||*|||||||||||||| targets:1927   AGAAGAAGCUGCACUUGCUG   1946 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:002-182-F04, full insert sequence	NA	coding protein	psRNATarget
XM_015767049.1	ncRNA:20   ACGUCAUCGACGUGAACGAC   1   *|*||*|||||||||||||| targets:1921   AGAAGAAGCUGCACUUGCUG   1940 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group crossover junction endonuclease MUS81 (LOC4325837), transcript variant X1, mRNA	crossover junction endonuclease MUS81(LOC4325837)	coding protein	psRNATarget
XM_015767053.1	ncRNA:20   ACGUCAUCGACGUGAACGAC   1   *|*||*|||||||||||||| targets:1832   AGAAGAAGCUGCACUUGCUG   1851 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group crossover junction endonuclease MUS81 (LOC4325837), transcript variant X2, mRNA	crossover junction endonuclease MUS81(LOC4325837)	coding protein	psRNATarget