ncRNA ID | novel_zma_miR5385 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:212607348-212607421 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287165;SRR2089698;SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 51 - GGGGGCUCCAACCGAGGUUAGCAU - 74 |
Stem-loop(if miRNA) |
--     UU  -UC  C  C       U      UAUG   GUUAG  UU   UG GA CCCUUAG CAUAUA    U   |||||  ||   || || ||||||| ||||||   CGAUU  AG   AC CU GGGGGUC GUGUGU    A UA     GG  CCA  -  C       U      UGCG |
Stem-loop sequence | GUUAGUUUUUCUGCGACCCCUUAGUCAUAUAUAUGUAGCGUUGUGUGUCUGGGGGCUCCAACCGAGGUUAGCAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020537903.1 |
|
0.0 | PREDICTED: Zea mays auxin-responsive protein SAUR72-like (LOC109939618), mRNA | NA | coding protein | psRNATarget | |||||||||
BT061256.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0127C16 mRNA, complete cds | NA | coding protein | psRNATarget |