ncRNA ID | novel_zma_miR5380 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:87672238-87672453 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287165 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UAGACGAUGUUGAGCCGGUGU - 21 |
Stem-loop(if miRNA) |
--         U              A                         A               G   G                    G  G  G       U   UAGACGAUG UGAGCCGGUGUACU UGUCCGGAUGUGUGGUCACAAAAUU AAAGCCGCCCCGGCU CAU UGUGUGCUUCUCUUCUCUUA GU GG UGCUAAG G   ||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||| || || |||||||   GUCUGCUAC ACUCGGCCACAUGA ACAGGCCUACACACCAGUGUUUUAA UUUCGGCGGGGCCGA GUA ACACGCGAAGAGAAGAGAAU CA CC AUGAUUC A CG         C              G                         A               A   G                    A  G  G       U |
Stem-loop sequence | UAGACGAUGUUGAGCCGGUGUACUAUGUCCGGAUGUGUGGUCACAAAAUUAAAAGCCGCCCCGGCUGCAUGUGUGUGCUUCUCUUCUCUUAGGUGGGGUGCUAAGUGAUCUUAGUAGCCGACAUAAGAGAAGAGAAGCGCACAGAUGAAGCCGGGGCGGCUUUAAAUUUUGUGACCACACAUCCGGACAGAGUACACCGGCUCACCAUCGUCUGGC |