ncRNA ID | novel_zma_miR5357 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:230713641-230713752 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287165 |
Length | 23 |
Mature sequence(if miRNA) | 90 - AAAUUGAAUAAGGAGAGGAUUUU - 112 |
Stem-loop(if miRNA) |
--AAA              G       C C  CA      C       C      U      UUGAAUAAGGAGAG AUUUUAG C CU  AAUCCC UCCGGUU UGUGGC G      |||||||||||||| ||||||| | ||  |||||| ||||||| |||||| G      AAUUUAUUCUUCUU UAAAAUC G GA  UUAGGG AGGCUAA ACACUG C AUUAA              G       A U  AG      -       A      A |
Stem-loop sequence | AAAUUGAAUAAGGAGAGGAUUUUAGCCCCUCAAAUCCCCUCCGGUUCUGUGGCUGGCAGUCACAAAAUCGGAGGGAUUGAAGUGACUAAAAUGUUCUUCUUAUUUAAAAUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008662350.2 |
|
2.5 | PREDICTED: Zea mays paramyosin (LOC103639615), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008664337.2 |
|
2.5 | PREDICTED: Zea mays ABC transporter F family member 1 (LOC103640881), mRNA | NA | coding protein | psRNATarget |