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BaseInfo

ncRNA ID	novel_zma_miR5355
Species	Zea mays
Class	miRNA
Genome position	Chr10:140659598-140659716 [+]
Reference genome	RefGen_v4
Source	SRR1618883
Length	24
Mature sequence(if miRNA)	96 - CGUAGCAACGUCGAGGUAGAGCGU - 119
Stem-loop(if miRNA)	--   -G   A  A        A     U  --GCG       U  ----    GU     --  G   GCU  GCC UC GACGUUGC UGCGA GU     CUGUAUU GA    CCGU  AGCCG  AG G   |||  ||| || |||||||| ||||| ||     ||||||| ||    ||||  |||||  ||   CGA  UGG AG CUGCAACG AUGCU UA     GACGUAG CU    GGCA  UCGGC  UC A UG   GA   -  -        -     C  GUCUA       -  GAGA    GU     CG  C
Stem-loop sequence	GCUGGCCAUCAGACGUUGCAUGCGAUGUGCGCUGUAUUUGACCGUGUAGCCGAGGGACCUGCCGGCUUGACGGAGAGUCGAUGCAGAUCUGAUCUCGUAGCAACGUCGAGGUAGAGCGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU946036.1	ncRNA:24   UGCGAGAUGGAGCUGCAACGAUGC   1   ||||||||||||||||||||||=| targets:165   ACGCUCUACCUCGACGUUGCUAUG   188 Target Full Sequence	1.5	Zea mays clone 294171 mRNA sequence	NA	coding protein	psRNATarget
EU968673.1	ncRNA:24   UGCGAGAUGGAGCUGCAACGAUGC   1   |||||||||||||||||||||=|| targets:115   ACGCUCUACCUCGACGUUGCUGCG   138 Target Full Sequence	1.5	Zea mays clone 323268 mRNA sequence	NA	coding protein	psRNATarget
EU948124.1	ncRNA:24   UGCGAGAUGGAGCUGCAACGAUGC   1   |||||||||||||||||||||=|| targets:92   ACGCUCUACCUCGACGUUGCUGCG   115 Target Full Sequence	1.5	Zea mays clone 370140 mRNA sequence	NA	coding protein	psRNATarget
EU949311.1	ncRNA:24   UGCGAGAUGGAGCUGCAACGAUGC   1   ||||||||||||||||||||||=| targets:164   ACGCUCUACCUCGACGUUGCUAUG   187 Target Full Sequence	1.5	Zea mays clone 400967 mRNA sequence	NA	coding protein	psRNATarget