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BaseInfo

ncRNA ID	novel_zma_miR5327
Species	Zea mays
Class	miRNA
Genome position	Chr1:248213079-248213173 [+]
Reference genome	RefGen_v4
Source	SRR2287165
Length	24
Mature sequence(if miRNA)	1 - AAUCCAUGUGGAUUGAGUGGAAUU - 24
Stem-loop(if miRNA)	--AAUC               GA     GU  UU    AUCCCAAGC       CAUGUGGAUUGAGUG  AUUGG  GA  UUAA         A       |||||||||||||||  |||||  ||  ||||         A       GUGUACCUAACUUAC  UAACC  UU  AAUU         C GGUAAU               UC     GU  UU    CUUCAAACU
Stem-loop sequence	AAUCCAUGUGGAUUGAGUGGAAUUGGGUGAUUUUAAAUCCCAAGCAACUCAAACUUCUUAAUUUUUGCCAAUCUCAUUCAAUCCAUGUGUAAUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020546136.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   ||||||||||||||=||||||||| targets:3284   AAUUCCACUCAAUCUACAUGGAUU   3307 Target Full Sequence	1.5	PREDICTED: Zea mays protein FAR1-RELATED SEQUENCE 6 (LOC103642139), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020546135.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   ||||||||||||||=||||||||| targets:3137   AAUUCCACUCAAUCUACAUGGAUU   3160 Target Full Sequence	1.5	PREDICTED: Zea mays protein FAR1-RELATED SEQUENCE 6 (LOC103642139), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU948930.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   ||||||||||||||=||||||||| targets:425   AAUUCCACUCAAUCUACAUGGAUU   448 Target Full Sequence	1.5	Zea mays clone 390579 mRNA sequence	NA	coding protein	psRNATarget
XM_020545430.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:5809   AAUCCCACUCAAUCCACAUGGAUU   5832 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC109942872 (LOC109942872), mRNA	NA	coding protein	psRNATarget
XM_008658241.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:1234   AAUCCCACUCAAUCCACAUGGAUU   1257 Target Full Sequence	0.0	PREDICTED: Zea mays probable peptidyl-tRNA hydrolase 2 (LOC103635865), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020549842.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:1204   AAUCCCACUCAAUCCACAUGGAUU   1227 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100381972 (LOC100381972), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020549841.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:1204   AAUCCCACUCAAUCCACAUGGAUU   1227 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100381972 (LOC100381972), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020549843.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:1086   AAUCCCACUCAAUCCACAUGGAUU   1109 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100381972 (LOC100381972), transcript variant X3, mRNA	NA	coding protein	psRNATarget
BT066874.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:1963   AAUCCCACUCAAUCCACAUGGAUU   1986 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0081D21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175969.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:1963   AAUCCCACUCAAUCCACAUGGAUU   1986 Target Full Sequence	0.0	Zea mays uncharacterized LOC100383311 (LOC100383311), mRNA	NA	coding protein	psRNATarget
XM_008679547.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:2505   AAUCCCACUCAAUCCACAUGGAUU   2528 Target Full Sequence	0.0	PREDICTED: Zea mays putative methyltransferase PMT15 (LOC101027245), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008661718.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:2216   AAUCCCACUCAAUCCACAUGGAUU   2239 Target Full Sequence	0.0	PREDICTED: Zea mays serine/arginine repetitive matrix protein 1 (LOC103638926), mRNA	NA	coding protein	psRNATarget
EU955633.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:1820   AAUCCCACUCAAUCCACAUGGAUU   1843 Target Full Sequence	0.0	Zea mays clone 1540038 transposon protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001154031.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:1820   AAUCCCACUCAAUCCACAUGGAUU   1843 Target Full Sequence	0.0	Zea mays uncharacterized LOC100281112 (LOC100281112), mRNA	NA	coding protein	psRNATarget
NM_001279968.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:1535   AAUCCCACUCAAUCCACAUGGAUU   1558 Target Full Sequence	0.0	Zea mays putative methyltransferase PMT15 (LOC101027245), mRNA	NA	coding protein	psRNATarget
BT088232.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:1535   AAUCCCACUCAAUCCACAUGGAUU   1558 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0086F14 mRNA, complete cds	NA	coding protein	psRNATarget
BT066987.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:1420   AAUCCCACUCAAUCCACAUGGAUU   1443 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0138F03 mRNA, complete cds	NA	coding protein	psRNATarget
BT069115.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:533   AAUCCCACUCAAUCCACAUGGAUU   556 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0186N21 mRNA, complete cds	NA	coding protein	psRNATarget
BT041052.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:1129   AAUCCCACUCAAUCCACAUGGAUU   1152 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0169K03 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001147844.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:1129   AAUCCCACUCAAUCCACAUGGAUU   1152 Target Full Sequence	0.0	Zea mays Phytanoyl-CoA dioxygenase (LOC100273407), mRNA	NA	coding protein	psRNATarget
BT085319.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:181   AAUCCCACUCAAUCCACAUGGAUU   204 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0375P22 mRNA, complete cds	NA	coding protein	psRNATarget
EU952677.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:990   AAUACCACUCAAUCCACAUGGAUU   1013 Target Full Sequence	0.0	Zea mays clone 1286167 mitochondrial glycoprotein mRNA, complete cds; nuclear gene for mitochondrial product	NA	coding protein	psRNATarget
BT042439.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:968   AAUACCACUCAAUCCACAUGGAUU   991 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0234C02 mRNA, complete cds	NA	coding protein	psRNATarget
BT066125.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:1077   AAUACCACUCAAUCCACAUGGAUU   1100 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0377H04 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020552889.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:879   AAUCCCACUCAAUCCACAUGGAUU   902 Target Full Sequence	0.0	PREDICTED: Zea mays pre-mRNA-splicing factor CWC21-like (LOC103654764), transcript variant X5, mRNA	NA	coding protein	psRNATarget
EU951448.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:750   AAUCCCACUCAAUCCACAUGGAUU   773 Target Full Sequence	0.0	Zea mays clone 701961 mRNA sequence	NA	coding protein	psRNATarget
EU942673.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:96   AAUCCCACUCAAUCCACAUGGAUU   119 Target Full Sequence	0.0	Zea mays clone 1529344 mRNA sequence	NA	coding protein	psRNATarget
HI403090.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:103   AAUCCCACUCAAUCCACAUGGAUU   126 Target Full Sequence	0.0	Sequence 1215 from Patent EP2074227	NA	coding protein	psRNATarget
HI403094.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:103   AAUCCCACUCAAUCCACAUGGAUU   126 Target Full Sequence	0.0	Sequence 1219 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235224.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:103   AAUCCCACUCAAUCCACAUGGAUU   126 Target Full Sequence	0.0	Sequence 1219 from Patent EP2985353	NA	coding protein	psRNATarget
JB163551.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:103   AAUCCCACUCAAUCCACAUGGAUU   126 Target Full Sequence	0.0	Sequence 1215 from Patent EP2559767	NA	coding protein	psRNATarget
JB163555.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:103   AAUCCCACUCAAUCCACAUGGAUU   126 Target Full Sequence	0.0	Sequence 1219 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235220.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:103   AAUCCCACUCAAUCCACAUGGAUU   126 Target Full Sequence	0.0	Sequence 1215 from Patent EP2985353	NA	coding protein	psRNATarget
JB163481.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:103   AAUCCCACUCAAUCCACAUGGAUU   126 Target Full Sequence	0.0	Sequence 1145 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235150.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:103   AAUCCCACUCAAUCCACAUGGAUU   126 Target Full Sequence	0.0	Sequence 1145 from Patent EP2985353	NA	coding protein	psRNATarget
HI403020.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:103   AAUCCCACUCAAUCCACAUGGAUU   126 Target Full Sequence	0.0	Sequence 1145 from Patent EP2074227	NA	coding protein	psRNATarget
HI405841.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:94   AAUCCCACUCAAUCCACAUGGAUU   117 Target Full Sequence	0.0	Sequence 3966 from Patent EP2074227	NA	coding protein	psRNATarget
JB166302.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:94   AAUCCCACUCAAUCCACAUGGAUU   117 Target Full Sequence	0.0	Sequence 3966 from Patent EP2559767	NA	coding protein	psRNATarget
LQ237971.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:94   AAUCCCACUCAAUCCACAUGGAUU   117 Target Full Sequence	0.0	Sequence 3966 from Patent EP2985353	NA	coding protein	psRNATarget
LQ238032.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:85   AAUCCCACUCAAUCCACAUGGAUU   108 Target Full Sequence	0.0	Sequence 4027 from Patent EP2985353	NA	coding protein	psRNATarget
JB166363.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:85   AAUCCCACUCAAUCCACAUGGAUU   108 Target Full Sequence	0.0	Sequence 4027 from Patent EP2559767	NA	coding protein	psRNATarget
HI405902.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:85   AAUCCCACUCAAUCCACAUGGAUU   108 Target Full Sequence	0.0	Sequence 4027 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238019.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:84   AAUCCCACUCAAUCCACAUGGAUU   107 Target Full Sequence	0.0	Sequence 4014 from Patent EP2985353	NA	coding protein	psRNATarget
JB166350.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:84   AAUCCCACUCAAUCCACAUGGAUU   107 Target Full Sequence	0.0	Sequence 4014 from Patent EP2559767	NA	coding protein	psRNATarget
HI405889.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||||||||||||||||| targets:84   AAUCCCACUCAAUCCACAUGGAUU   107 Target Full Sequence	0.0	Sequence 4014 from Patent EP2074227	NA	coding protein	psRNATarget
XM_020542399.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||=|||||||||||||| targets:7265   AAUCCCACUUAAUCCACAUGGAUU   7288 Target Full Sequence	1.0	PREDICTED: Zea mays acyl-coenzyme A thioesterase 13 (LOC103635012), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008657578.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||=|||||||||||||| targets:7254   AAUCCCACUUAAUCCACAUGGAUU   7277 Target Full Sequence	1.0	PREDICTED: Zea mays acyl-coenzyme A thioesterase 13 (LOC103635012), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008657579.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||=|||||||||||||| targets:7150   AAUCCCACUUAAUCCACAUGGAUU   7173 Target Full Sequence	1.0	PREDICTED: Zea mays acyl-coenzyme A thioesterase 13 (LOC103635012), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020539703.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||=||||||||||||||||| targets:65   AAUCCCGCUCAAUCCACAUGGAUU   88 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC109940256 (LOC109940256), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008674375.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||||||||||||||||| targets:3443   AAUCUCACUCAAUCCACAUGGAUU   3466 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100276614 (LOC100276614), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008674375.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |*||||*||||||||||||||||| targets:3517   AUUUCCUCUCAAUCCACAUGGAUU   3540 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100276614 (LOC100276614), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008674376.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||||||||||||||||| targets:3412   AAUCUCACUCAAUCCACAUGGAUU   3435 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100276614 (LOC100276614), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008674376.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |*||||*||||||||||||||||| targets:3486   AUUUCCUCUCAAUCCACAUGGAUU   3509 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100276614 (LOC100276614), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008674377.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||||||||||||||||| targets:3399   AAUCUCACUCAAUCCACAUGGAUU   3422 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100276614 (LOC100276614), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008674377.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |*||||*||||||||||||||||| targets:3473   AUUUCCUCUCAAUCCACAUGGAUU   3496 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100276614 (LOC100276614), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020548583.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   ||||||||*||||||=|||||||| targets:3060   AAUUCCACCCAAUCCGCAUGGAUU   3083 Target Full Sequence	2.5	PREDICTED: Zea mays B3 domain-containing protein Os07g0563300-like (LOC109944078), mRNA	NA	coding protein	psRNATarget
XM_020541448.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||=||||||||||||||||| targets:2909   AAUCCCGCUCAAUCCACAUGGAUU   2932 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103634414 (LOC103634414), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020541449.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||=||||||||||||||||| targets:2805   AAUCCCGCUCAAUCCACAUGGAUU   2828 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103634414 (LOC103634414), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020549703.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||||||||||||||||| targets:2353   AAUCUCACUCAAUCCACAUGGAUU   2376 Target Full Sequence	0.0	PREDICTED: Zea mays protein kinase domain containing protein (LOC100281444), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020549704.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||||||||||||||||| targets:2293   AAUCUCACUCAAUCCACAUGGAUU   2316 Target Full Sequence	0.0	PREDICTED: Zea mays protein kinase domain containing protein (LOC100281444), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008674604.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||||||||||||||||| targets:2286   AAUCUCACUCAAUCCACAUGGAUU   2309 Target Full Sequence	0.0	PREDICTED: Zea mays protein kinase domain containing protein (LOC100281444), transcript variant X3, mRNA	NA	coding protein	psRNATarget
EU956718.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||||||||||||||||| targets:2158   AAUCUCACUCAAUCCACAUGGAUU   2181 Target Full Sequence	0.0	Zea mays clone 1571610 protein kinase domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001154362.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||||||||||||||||| targets:2157   AAUCUCACUCAAUCCACAUGGAUU   2180 Target Full Sequence	0.0	Zea mays protein kinase domain containing protein (LOC100281444), mRNA	NA	coding protein	psRNATarget
XM_008669549.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||||||||||||=||||||| targets:2087   AAUCCCACUCAAUCCAUAUGGAUU   2110 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC100279312), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008664275.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||=||||||||||||||||| targets:2145   AAUCCCGCUCAAUCCACAUGGAUU   2168 Target Full Sequence	1.0	PREDICTED: Zea mays DEAD-box ATP-dependent RNA helicase 27 (LOC103640803), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT063416.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||||||||||||||||| targets:2085   AAUCUCACUCAAUCCACAUGGAUU   2108 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0061L20 mRNA, complete cds	NA	coding protein	psRNATarget
BT018903.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||=||||||||||||||||| targets:2034   AAUCCCGCUCAAUCCACAUGGAUU   2057 Target Full Sequence	1.0	Zea mays clone EL01T0208C03.d mRNA sequence	NA	coding protein	psRNATarget
XM_008664276.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||=||||||||||||||||| targets:2052   AAUCCCGCUCAAUCCACAUGGAUU   2075 Target Full Sequence	1.0	PREDICTED: Zea mays DEAD-box ATP-dependent RNA helicase 27 (LOC103640803), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008645867.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||=||||||||||||||||| targets:1957   AAUCCCGCUCAAUCCACAUGGAUU   1980 Target Full Sequence	1.0	PREDICTED: Zea mays Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform (LOC100383610), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020553538.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||=||||||||||||||||| targets:1891   AAUCCCGCUCAAUCCACAUGGAUU   1914 Target Full Sequence	1.0	PREDICTED: Zea mays Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform (LOC100383610), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008645912.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||=||||||||||||||||| targets:1624   AAUCCCGCUCAAUCCACAUGGAUU   1647 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100383981 (LOC100383981), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT042044.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||||||||||||=||||||| targets:1370   AAUCCCACUCAAUCCAUAUGGAUU   1393 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0117M08 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001174368.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||||||||||||||||| targets:1448   AAUCUCACUCAAUCCACAUGGAUU   1471 Target Full Sequence	0.0	Zea mays hypothetical protein (LOC100381539), mRNA	NA	coding protein	psRNATarget
BT061560.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||||||||||||||||| targets:1448   AAUCUCACUCAAUCCACAUGGAUU   1471 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0158C09 mRNA, complete cds	NA	coding protein	psRNATarget
BT068797.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||=||||||||||||||||| targets:1133   AAUCCCGCUCAAUCCACAUGGAUU   1156 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0382L20 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176594.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||=||||||||||||||||| targets:1133   AAUCCCGCUCAAUCCACAUGGAUU   1156 Target Full Sequence	1.0	Zea mays uncharacterized LOC100383981 (LOC100383981), mRNA	NA	coding protein	psRNATarget
BT062183.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||||||||||||||||| targets:251   AAUCUCACUCAAUCCACAUGGAUU   274 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0224O15 mRNA, complete cds	NA	coding protein	psRNATarget
BT086633.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||||||||||||||||| targets:460   AAUCUCACUCAAUCCACAUGGAUU   483 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFa0068P14 mRNA, complete cds	NA	coding protein	psRNATarget
JB163480.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||=|||||||||||||| targets:103   AAUCCCACUUAAUCCACAUGGAUU   126 Target Full Sequence	1.0	Sequence 1144 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235149.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||=|||||||||||||| targets:103   AAUCCCACUUAAUCCACAUGGAUU   126 Target Full Sequence	1.0	Sequence 1144 from Patent EP2985353	NA	coding protein	psRNATarget
HI403019.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||||=|||||||||||||| targets:103   AAUCCCACUUAAUCCACAUGGAUU   126 Target Full Sequence	1.0	Sequence 1144 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238008.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||||||||||||||||| targets:96   AAUCUCACUCAAUCCACAUGGAUU   119 Target Full Sequence	0.0	Sequence 4003 from Patent EP2985353	NA	coding protein	psRNATarget
HI405878.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||||||||||||||||| targets:96   AAUCUCACUCAAUCCACAUGGAUU   119 Target Full Sequence	0.0	Sequence 4003 from Patent EP2074227	NA	coding protein	psRNATarget
JB166339.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||||||||||||||||| targets:96   AAUCUCACUCAAUCCACAUGGAUU   119 Target Full Sequence	0.0	Sequence 4003 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238007.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||||||||||||||||| targets:92   AAUCUCACUCAAUCCACAUGGAUU   115 Target Full Sequence	0.0	Sequence 4002 from Patent EP2985353	NA	coding protein	psRNATarget
JB166338.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||||||||||||||||| targets:92   AAUCUCACUCAAUCCACAUGGAUU   115 Target Full Sequence	0.0	Sequence 4002 from Patent EP2559767	NA	coding protein	psRNATarget
HI405877.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||||||||||||||||| targets:92   AAUCUCACUCAAUCCACAUGGAUU   115 Target Full Sequence	0.0	Sequence 4002 from Patent EP2074227	NA	coding protein	psRNATarget
HI405893.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||||||||||||||||| targets:84   AAUCUCACUCAAUCCACAUGGAUU   107 Target Full Sequence	0.0	Sequence 4018 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238023.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||||||||||||||||| targets:84   AAUCUCACUCAAUCCACAUGGAUU   107 Target Full Sequence	0.0	Sequence 4018 from Patent EP2985353	NA	coding protein	psRNATarget
JB166354.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||||||||||||||||| targets:84   AAUCUCACUCAAUCCACAUGGAUU   107 Target Full Sequence	0.0	Sequence 4018 from Patent EP2559767	NA	coding protein	psRNATarget
EZ092645.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||||||||||||||||| targets:21   AAUCUCACUCAAUCCACAUGGAUU   44 Target Full Sequence	0.0	TSA: Zea mays contig28294, mRNA sequence	NA	coding protein	psRNATarget
BT066229.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||=|||||||||||||| targets:2508   AAUAUCACUUAAUCCACAUGGAUU   2531 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0109O13 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175785.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=||||=|||||||||||||| targets:2508   AAUAUCACUUAAUCCACAUGGAUU   2531 Target Full Sequence	1.0	Zea mays Putative peptidyl-prolyl cis-trans isomerase and WD40 repeat domain family protein (LOC100383118), mRNA	NA	coding protein	psRNATarget
XM_008654741.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|=|=|||||||||||||||| targets:1882   AAUACUAUUCAAUCCACAUGGAUU   1905 Target Full Sequence	2.0	PREDICTED: Zea mays protein ROOT PRIMORDIUM DEFECTIVE 1 (LOC103633059), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008654742.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|=|=|||||||||||||||| targets:1818   AAUACUAUUCAAUCCACAUGGAUU   1841 Target Full Sequence	2.0	PREDICTED: Zea mays protein ROOT PRIMORDIUM DEFECTIVE 1 (LOC103633059), transcript variant X2, mRNA	NA	coding protein	psRNATarget
AY103719.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|==||||||||||||||||| targets:883   AAUCCUGCUCAAUCCACAUGGAUU   906 Target Full Sequence	2.0	Zea mays PCO137008 mRNA sequence	NA	coding protein	psRNATarget
AY112141.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=|||||||||=||||||||| targets:233   AAUCUCACUCAAUCUACAUGGAUU   256 Target Full Sequence	1.5	Zea mays CL24213_1 mRNA sequence	NA	coding protein	psRNATarget
JB166364.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|==||||||||||||||||| targets:84   AAUCCUGCUCAAUCCACAUGGAUU   107 Target Full Sequence	2.0	Sequence 4028 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238033.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|==||||||||||||||||| targets:84   AAUCCUGCUCAAUCCACAUGGAUU   107 Target Full Sequence	2.0	Sequence 4028 from Patent EP2985353	NA	coding protein	psRNATarget
HI405903.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|==||||||||||||||||| targets:84   AAUCCUGCUCAAUCCACAUGGAUU   107 Target Full Sequence	2.0	Sequence 4028 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238013.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|=|=|||||||||||||||| targets:79   AAUACUAUUCAAUCCACAUGGAUU   102 Target Full Sequence	2.0	Sequence 4008 from Patent EP2985353	NA	coding protein	psRNATarget
HI405883.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|=|=|||||||||||||||| targets:79   AAUACUAUUCAAUCCACAUGGAUU   102 Target Full Sequence	2.0	Sequence 4008 from Patent EP2074227	NA	coding protein	psRNATarget
JB166344.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|=|=|||||||||||||||| targets:79   AAUACUAUUCAAUCCACAUGGAUU   102 Target Full Sequence	2.0	Sequence 4008 from Patent EP2559767	NA	coding protein	psRNATarget
XM_008678388.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||||*||||||||||||||| targets:1832   AAUCCCACCCAAUCCACAUGGAUU   1855 Target Full Sequence	1.0	PREDICTED: Zea mays RNA-binding motif protein, X-linked 2 (LOC100282627), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008678390.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||||*||||||||||||||| targets:1816   AAUCCCACCCAAUCCACAUGGAUU   1839 Target Full Sequence	1.0	PREDICTED: Zea mays RNA-binding motif protein, X-linked 2 (LOC100282627), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008659614.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||||*||||||||||||||| targets:190   AAUCCCACACAAUCCACAUGGAUU   213 Target Full Sequence	1.0	PREDICTED: Zea mays mitogen-activated protein kinase kinase kinase A (LOC103637414), mRNA	NA	coding protein	psRNATarget
BT066441.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||||*||||||||||||||| targets:1532   AAUCCCACCCAAUCCACAUGGAUU   1555 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0165B04 mRNA, complete cds	NA	coding protein	psRNATarget
EU976164.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||||*||||||||||||||| targets:990   AAUACCACCCAAUCCACAUGGAUU   1013 Target Full Sequence	1.0	Zea mays clone 679349 mitochondrial glycoprotein mRNA, complete cds; nuclear gene for mitochondrial product	NA	coding protein	psRNATarget
NM_001159099.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||||*||||||||||||||| targets:990   AAUACCACCCAAUCCACAUGGAUU   1013 Target Full Sequence	1.0	Zea mays mitochondrial glycoprotein (LOC100286211), mRNA	NA	coding protein	psRNATarget
AY106055.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||||*||||||||||||||| targets:986   AAUACCACCCAAUCCACAUGGAUU   1009 Target Full Sequence	1.0	Zea mays PCO115884 mRNA sequence	NA	coding protein	psRNATarget
EZ064016.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||||||||||||||||*||| targets:125   AAUCCCACUCAAUCCACAUGAAUU   148 Target Full Sequence	1.5	TSA: Zea mays contig65139, mRNA sequence	NA	coding protein	psRNATarget
HI409272.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||||*||||||||||||||| targets:79   AAUCCCACCCAAUCCACAUGGAUU   102 Target Full Sequence	1.0	Sequence 7397 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241402.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||||*||||||||||||||| targets:79   AAUCCCACCCAAUCCACAUGGAUU   102 Target Full Sequence	1.0	Sequence 7397 from Patent EP2985353	NA	coding protein	psRNATarget
JB169733.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||||*||||||||||||||| targets:79   AAUCCCACCCAAUCCACAUGGAUU   102 Target Full Sequence	1.0	Sequence 7397 from Patent EP2559767	NA	coding protein	psRNATarget
XM_008675817.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||||||||||||||||||** targets:4062   AAUCCCACUCAAUCCACAUGGAAG   4085 Target Full Sequence	2.5	PREDICTED: Zea mays probable chromatin-remodeling complex ATPase chain (LOC103650180), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008666492.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|=|||||||||||||*|||| targets:3758   AAUCCUACUCAAUCCACAUAGAUU   3781 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103643333 (LOC103643333), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008666491.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|=|||||||||||||*|||| targets:3753   AAUCCUACUCAAUCCACAUAGAUU   3776 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103643333 (LOC103643333), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546709.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|=|||||||||||||*|||| targets:3471   AAUCCUACUCAAUCCACAUAGAUU   3494 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103643333 (LOC103643333), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008666493.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|=|||||||||||||*|||| targets:3485   AAUCCUACUCAAUCCACAUAGAUU   3508 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103643333 (LOC103643333), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008654744.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||||*|||||=||||||||| targets:2161   AAUACCACCCAAUCUACAUGGAUU   2184 Target Full Sequence	2.5	PREDICTED: Zea mays GTPase-activating protein gyp7 (LOC103633061), mRNA	NA	coding protein	psRNATarget
XM_008680349.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||*|||||||||=||||||| targets:1971   AAUCCCCCUCAAUCCAUAUGGAUU   1994 Target Full Sequence	2.5	PREDICTED: Zea mays peptidase/ serine-type peptidase (LOC100284377), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU955707.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||*|||||||||=||||||| targets:608   AAUCCCCCUCAAUCCAUAUGGAUU   631 Target Full Sequence	2.5	Zea mays clone 1543022 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_020551219.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||=*||||||||||||||| targets:294   AAUACCAUCCAAUCCACAUGGAUU   317 Target Full Sequence	2.0	PREDICTED: Zea mays WW domain-binding protein 11 (LOC100280956), mRNA	NA	coding protein	psRNATarget
EU962730.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||*|||||||||=||||||| targets:1075   AAUCCCUCUCAAUCCAUAUGGAUU   1098 Target Full Sequence	2.5	Zea mays clone 245054 mRNA sequence	NA	coding protein	psRNATarget
EU949831.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|=|||||||||||||*|||| targets:1018   AAUCCUACUCAAUCCACAUAGAUU   1041 Target Full Sequence	2.5	Zea mays clone 447574 mRNA sequence	NA	coding protein	psRNATarget
BT035134.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=|||*||||||||||||||| targets:1221   AAUCUCACCCAAUCCACAUGGAUU   1244 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0041I21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001138165.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=|||*||||||||||||||| targets:1221   AAUCUCACCCAAUCCACAUGGAUU   1244 Target Full Sequence	1.0	Zea mays B3 domain-containing protein (LOC100192994), mRNA	NA	coding protein	psRNATarget
BT068463.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||*|||||||||=||||||| targets:1211   AAUCCCCCUCAAUCCAUAUGGAUU   1234 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0213N24 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008647186.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=|||*||||||||||||||| targets:1059   AAUCUCACCCAAUCCACAUGGAUU   1082 Target Full Sequence	1.0	PREDICTED: Zea mays B3 domain-containing protein (LOC100192994), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT061531.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||*|||||||||=||||||| targets:851   AAUCCCCCUCAAUCCAUAUGGAUU   874 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0155L17 mRNA, complete cds	NA	coding protein	psRNATarget
BT087300.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*=|||*||||||||||||||| targets:1026   AAUCUCACCCAAUCCACAUGGAUU   1049 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0032O11 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152495.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||=|||||||||||||*|| targets:1134   AAUACCAUUCAAUCCACAUGGUUU   1157 Target Full Sequence	2.5	Zea mays OTU-like cysteine protease family protein (LOC100279494), mRNA	NA	coding protein	psRNATarget
BT054344.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||=|||||||||||||*|| targets:1134   AAUACCAUUCAAUCCACAUGGUUU   1157 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0357J03 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001151506.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||*|||||||||=||||||| targets:939   AAUCCCCCUCAAUCCAUAUGGAUU   962 Target Full Sequence	2.5	Zea mays ER membrane protein complex subunit 7-like protein (pco145885(696)), mRNA	NA	coding protein	psRNATarget
EU972032.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||*|||||||||=||||||| targets:939   AAUCCCCCUCAAUCCAUAUGGAUU   962 Target Full Sequence	2.5	Zea mays clone 373636 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
BT068594.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||*|||||||||=||||||| targets:909   AAUCCCCCUCAAUCCAUAUGGAUU   932 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0348O14 mRNA, complete cds	NA	coding protein	psRNATarget
AY104043.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||*|||||||||=||||||| targets:912   AAUCCCCCUCAAUCCAUAUGGAUU   935 Target Full Sequence	2.5	Zea mays PCO145885 mRNA sequence	NA	coding protein	psRNATarget
NM_001154922.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*====|||||||||||||||| targets:672   AAUCUUGUUCAAUCCACAUGGAUU   695 Target Full Sequence	3.0	Zea mays AGP16 (LOC100282009), mRNA	NA	coding protein	psRNATarget
EU945995.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||=*||||||||||||||| targets:558   AAUCCCAUCCAAUCCACAUGGAUU   581 Target Full Sequence	2.0	Zea mays clone 293035 mRNA sequence	NA	coding protein	psRNATarget
BT035019.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*====|||||||||||||||| targets:650   AAUCUUGUUCAAUCCACAUGGAUU   673 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0032E03 mRNA, complete cds	NA	coding protein	psRNATarget
AY111818.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*====|||||||||||||||| targets:657   AAUCUUGUUCAAUCCACAUGGAUU   680 Target Full Sequence	3.0	Zea mays CL6775_1 mRNA sequence	NA	coding protein	psRNATarget
EU942657.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|=|||||||||||||*|||| targets:240   AAUCCUACUCAAUCCACAUAGAUU   263 Target Full Sequence	2.5	Zea mays clone 1527578 mRNA sequence	NA	coding protein	psRNATarget
EU951312.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||*|||||||||=||||||| targets:372   AAUCCCCCUCAAUCCAUAUGGAUU   395 Target Full Sequence	2.5	Zea mays clone 695515 mRNA sequence	NA	coding protein	psRNATarget
EZ080006.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   ||*|||*|||||||||=||||||| targets:26   AAAUCCCCUCAAUCCAUAUGGAUU   49 Target Full Sequence	2.5	TSA: Zea mays contig15645, mRNA sequence	NA	coding protein	psRNATarget
JB170278.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||*|||||||||=||||||| targets:82   AAUCCCCCUCAAUCCAUAUGGAUU   105 Target Full Sequence	2.5	Sequence 7942 from Patent EP2559767	NA	coding protein	psRNATarget
HI409817.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||*|||||||||=||||||| targets:82   AAUCCCCCUCAAUCCAUAUGGAUU   105 Target Full Sequence	2.5	Sequence 7942 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241947.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||*|||||||||=||||||| targets:82   AAUCCCCCUCAAUCCAUAUGGAUU   105 Target Full Sequence	2.5	Sequence 7942 from Patent EP2985353	NA	coding protein	psRNATarget
LQ239247.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||||*|||||=||||||||| targets:81   AAUACCACCCAAUCUACAUGGAUU   104 Target Full Sequence	2.5	Sequence 5242 from Patent EP2985353	NA	coding protein	psRNATarget
JB167578.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||||*|||||=||||||||| targets:81   AAUACCACCCAAUCUACAUGGAUU   104 Target Full Sequence	2.5	Sequence 5242 from Patent EP2559767	NA	coding protein	psRNATarget
HI407117.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*||||*|||||=||||||||| targets:81   AAUACCACCCAAUCUACAUGGAUU   104 Target Full Sequence	2.5	Sequence 5242 from Patent EP2074227	NA	coding protein	psRNATarget
XM_008649520.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||**||||||||||||||||||* targets:1045   AAUAACACUCAAUCCACAUGGAUC   1068 Target Full Sequence	1.0	PREDICTED: Zea mays glycosyltransferase family protein 28 (IDP1988), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008649521.2	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||**||||||||||||||||||* targets:1016   AAUAACACUCAAUCCACAUGGAUC   1039 Target Full Sequence	1.0	PREDICTED: Zea mays glycosyltransferase family protein 28 (IDP1988), transcript variant X2, mRNA	NA	coding protein	psRNATarget
NM_001152975.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||**||||||||||||||||||* targets:964   AAUAACACUCAAUCCACAUGGAUC   987 Target Full Sequence	1.0	Zea mays glycosyltransferase family protein 28 (IDP1988), mRNA	NA	coding protein	psRNATarget
BT055408.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||**||||||||||||||||||* targets:964   AAUAACACUCAAUCCACAUGGAUC   987 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0147G07 mRNA, complete cds	NA	coding protein	psRNATarget
EZ069047.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||**||||||||||||||||||* targets:30   AAUAACACUCAAUCCACAUGGAUC   53 Target Full Sequence	1.0	TSA: Zea mays contig04682, mRNA sequence	NA	coding protein	psRNATarget
LQ235396.1	ncRNA:23   UAAGGUGAGUUAGGUGUACCUAA   1   ||*|||||||||||||*|||||| targets:1   AUACCACUCAAUCCACUUGGAUU   23 Target Full Sequence	1.5	Sequence 1391 from Patent EP2985353	NA	coding protein	psRNATarget
HI403266.1	ncRNA:23   UAAGGUGAGUUAGGUGUACCUAA   1   ||*|||||||||||||*|||||| targets:1   AUACCACUCAAUCCACUUGGAUU   23 Target Full Sequence	1.5	Sequence 1391 from Patent EP2074227	NA	coding protein	psRNATarget
JB163727.1	ncRNA:23   UAAGGUGAGUUAGGUGUACCUAA   1   ||*|||||||||||||*|||||| targets:1   AUACCACUCAAUCCACUUGGAUU   23 Target Full Sequence	1.5	Sequence 1391 from Patent EP2559767	NA	coding protein	psRNATarget
XM_020551501.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   **||*|||*|||||||=||||||| targets:1221   UUUUGCACCCAAUCCAUAUGGAUU   1244 Target Full Sequence	2.5	PREDICTED: Zea mays RNA-binding (RRM/RBD/RNP motifs) family protein (cl12347_2a), transcript variant X2, mRNA	NA	coding protein	psRNATarget
NM_001350737.1	ncRNA:24   UUAAGGUGAGUUAGGUGUACCUAA   1   |||*|||=*=|||||||||||||| targets:4056   AAUACCAUCUAAUCCACAUGGAUU   4079 Target Full Sequence	3.0	Zea mays phospholipase D family protein (LOC100272416), mRNA	NA	coding protein	psRNATarget