ncRNA ID | novel_zma_miR5325 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:9190023-9190210 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287165 |
Length | 24 |
Mature sequence(if miRNA) | 165 - AAACGAUAAGUAGAUUUGAUUUGA - 188 |
Stem-loop(if miRNA) |
--             C         -AC           A                --------UA   A  - ACAGGCCACCUAAGACGCCUUUAGU   AAAUCAAAUCUAC UAUCGUUUU   CUUAUGCAUUA GAGUAGCUCUAGUUUA          UAG UG G                         C   ||||||||||||| |||||||||   ||||||||||| ||||||||||||||||          ||| || |                         G   UUUAGUUUAGAUG AUAGCAAAA   GAAUACGUAAU CUCAUCGAGAUCAAAU          UGG AG U                         A AG             A         AUA           C                UGGAAGGAGA   -  U UAGAAUUAGAGAGAAGCAGAGAAGU |
Stem-loop sequence | AAAUCAAAUCUACCUAUCGUUUUACCUUAUGCAUUAAGAGUAGCUCUAGUUUAUAUAGAUGGACAGGCCACCUAAGACGCCUUUAGUCGAUGAAGAGACGAAGAGAGAUUAAGAUUUGAGGUAGAGGAAGGUUAAACUAGAGCUACUCCUAAUGCAUAAGAUAAAAACGAUAAGUAGAUUUGAUUUGA |