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BaseInfo

ncRNA ID novel_zma_miR5314
Species Zea mays
Class miRNA
Genome position Chr8:92866702-92866777 [-]
Reference genome RefGen_v4
Source SRR2287165
Length 24
Mature sequence(if miRNA) 53 - AGUUGGCUCUCGGCAAAGACUGAC - 76
Stem-loop(if miRNA) --AGUU              -A   ---A        AGC
      GGCUCUCGGCAAAG  CUG    CGGUCGUC   U
      ||||||||||||||  |||    ||||||||
      CCGAGAGCCGUUUC  GGC    GCCGGCAG   U
UUUCCC              CA   AGUC        GGU
Stem-loop sequence AGUUGGCUCUCGGCAAAGACUGACGGUCGUCAGCUUUGGGACGGCCGCUGACGGACCUUUGCCGAGAGCCCCCUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001175015.1
ncRNA:24   CAGUCAGAAACGGCUCUCGGUUGA   1
  |||||||||||||||||||||||*
targets:1246   GUCAGUCUUUGCCGAGAGCCAACG   1269

1.0 Zea mays uncharacterized LOC100382263 (LOC100382263), mRNA NA coding protein psRNATarget
BT063684.1
ncRNA:24   CAGUCAGAAACGGCUCUCGGUUGA   1
  |||||||||||||||||||||||*
targets:1246   GUCAGUCUUUGCCGAGAGCCAACG   1269

1.0 Zea mays full-length cDNA clone ZM_BFc0094N19 mRNA, complete cds NA coding protein psRNATarget