ncRNA ID | novel_zma_miR5300 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:111768252-111768322 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287165 |
Length | 24 |
Mature sequence(if miRNA) | 48 - UGGUAAUCUGGAACGGAGCGGUUU - 71 |
Stem-loop(if miRNA) |
--        A    U    -     A       CG   GCCGUUCC UUCC GAUU CUAGG ACGGAGC  C   |||||||| |||| |||| ||||| |||||||   UGGCGAGG AAGG CUAA GGUUU UGUCUUG  U UU        C    U    U     G       UC |
Stem-loop sequence | GCCGUUCCAUUCCUGAUUCUAGGAACGGAGCCGCUCUGUUCUGUGUUUGGUAAUCUGGAACGGAGCGGUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020542520.1 |
|
0.0 | PREDICTED: Zea mays putative ubiquitin-conjugating enzyme E2 38 (LOC100502147), transcript variant X2, mRNA | NA | coding protein | psRNATarget |