Search result

BaseInfo

ncRNA ID	novel_zma_miR5292
Species	Zea mays
Class	miRNA
Genome position	Chr7:129869229-129869283 [-]
Reference genome	RefGen_v4
Source	SRR2287165
Length	24
Mature sequence(if miRNA)	1 - CUCGGUAAAGUUAGGAUCUCGGCA - 24
Stem-loop(if miRNA)	--     U   G  UU               CCGAG AUU UA  CUUUGCCGAGUGC   ||||| ||| ||  ||||||||||||C   GGCUC UAG AU  GAAAUGGCUCACG AC     -   G  -U
Stem-loop sequence	CCGAGUAUUGUAUUCUUUGCCGAGUGCCGCACUCGGUAAAGUUAGGAUCUCGGCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI405862.1	ncRNA:24   ACGGCUCUAGGAUUGAAAUGGCUC   1   ||||||||||||||||||=||||| targets:154   UGCCGAGAUCCUAACUUUGCCGAG   177 Target Full Sequence	1.5	Sequence 3987 from Patent EP2074227	NA	coding protein	psRNATarget
JB166323.1	ncRNA:24   ACGGCUCUAGGAUUGAAAUGGCUC   1   ||||||||||||||||||=||||| targets:154   UGCCGAGAUCCUAACUUUGCCGAG   177 Target Full Sequence	1.5	Sequence 3987 from Patent EP2559767	NA	coding protein	psRNATarget
LQ237992.1	ncRNA:24   ACGGCUCUAGGAUUGAAAUGGCUC   1   ||||||||||||||||||=||||| targets:154   UGCCGAGAUCCUAACUUUGCCGAG   177 Target Full Sequence	1.5	Sequence 3987 from Patent EP2985353	NA	coding protein	psRNATarget
AF439722.1	ncRNA:24   ACGGCUCUAGGAUUGAAAUGGCUC   1   **||*|||||||||||*||||||* targets:427   AUCCCAGAUCCUAACUCUACCGAU   450 Target Full Sequence	2.5	Zea mays S-adenosyl-L-homocysteine hydrolase mRNA, partial cds	NA	coding protein	psRNATarget