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BaseInfo

ncRNA ID	novel_zma_miR5291
Species	Zea mays
Class	miRNA
Genome position	Chr7:151477291-151477333 [-]
Reference genome	RefGen_v4
Source	SRR2287165
Length	20
Mature sequence(if miRNA)	1 - ACCUCGGCACCAUAGGCUAU - 20
Stem-loop(if miRNA)	--  G      C      AUG   AG CUAUGG GCCGAG   U   || |||||| ||||||   G   UC GAUACC CGGCUC   U UA  G      A      CAU
Stem-loop sequence	AGGCUAUGGCGCCGAGAUGUGUUACCUCGGCACCAUAGGCUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008654031.2	ncRNA:20   UAUCGGAUACCACGGCUCCA   1   ||=||||||||||||||||| targets:1342   AUGGCCUAUGGUGCCGAGGU   1361 Target Full Sequence	1.0	PREDICTED: Zea mays peroxidase 2 (LOC103632211), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020541199.1	ncRNA:20   UAUCGGAUACCACGGCUCCA   1   ||||||*||||*|||||||| targets:17   AUAGCCAAUGGCGCCGAGGU   36 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541199.1	ncRNA:20   UAUCGGAUACCACGGCUCCA   1   ||||*||||||*|||||||| targets:53   AUAGGCUAUGGCGCCGAGGU   72 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541198.1	ncRNA:20   UAUCGGAUACCACGGCUCCA   1   ||||||*||||*|||||||| targets:15   AUAGCCAAUGGCGCCGAGGU   34 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020541198.1	ncRNA:20   UAUCGGAUACCACGGCUCCA   1   ||||*||||||*|||||||| targets:51   AUAGGCUAUGGCGCCGAGGU   70 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008655193.2	ncRNA:20   UAUCGGAUACCACGGCUCCA   1   ||||||*||||*|||||||| targets:75   AUAGCCAAUGGCGCCGAGGU   94 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008655193.2	ncRNA:20   UAUCGGAUACCACGGCUCCA   1   ||||*||||||*|||||||| targets:111   AUAGGCUAUGGCGCCGAGGU   130 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008655192.2	ncRNA:20   UAUCGGAUACCACGGCUCCA   1   ||||||*||||*|||||||| targets:75   AUAGCCAAUGGCGCCGAGGU   94 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008655192.2	ncRNA:20   UAUCGGAUACCACGGCUCCA   1   ||||*||||||*|||||||| targets:111   AUAGGCUAUGGCGCCGAGGU   130 Target Full Sequence	2.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001137355.1	ncRNA:20   UAUCGGAUACCACGGCUCCA   1   ||||*||||||*|||||||| targets:691   AUAGGCUAUGGCGCCGAGGU   710 Target Full Sequence	2.5	Zea mays SAUR56-auxin-responsive SAUR family member (LOC100191931), mRNA	NA	coding protein	psRNATarget
BT034188.1	ncRNA:20   UAUCGGAUACCACGGCUCCA   1   ||||*||||||*|||||||| targets:691   AUAGGCUAUGGCGCCGAGGU   710 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0029I19 mRNA, complete cds	NA	coding protein	psRNATarget