ncRNA ID | novel_zma_miR5276 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:47829274-47829430 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287165 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGCCGACGGGAAUAGUCUAAUUU - 24 |
Stem-loop(if miRNA) |
--AA            -   C    UU        -CACCUA  A         C                 C   CAAG     GCCGACGGGAAU AGU UAAU  CUGUCGGC       GU GCCGAUGGG AUUAUAUUAAUUUCCGU GGC    U     |||||||||||| ||| ||||  ||||||||       || ||||||||| ||||||||||||||||| |||     CGGCUGCCCUUA UCA AUUA  GGCAGCCG       CA CGGCUGCCC UAAUAUAAUUAAGGGCA CCG    C GCCC            A   -    GG        AACACUA  C         U                 A   AACA |
Stem-loop sequence | AAGCCGACGGGAAUAGUCUAAUUUCUGUCGGCCACCUAGUAGCCGAUGGGCAUUAUAUUAAUUUCCGUCGGCCAAGUCACAAGCCAACGGGAAUUAAUAUAAUUCCCGUCGGCCACAUCACAAGCCGACGGGGAUUAACUAAUUCCCGUCGGCCCCG |