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BaseInfo

ncRNA ID novel_zma_miR5276
Species Zea mays
Class miRNA
Genome position Chr6:47829274-47829430 [+]
Reference genome RefGen_v4
Source SRR2287165
Length 24
Mature sequence(if miRNA) 1 - AAGCCGACGGGAAUAGUCUAAUUU - 24
Stem-loop(if miRNA) --AA            -   C    UU        -CACCUA  A         C                 C   CAAG
    GCCGACGGGAAU AGU UAAU  CUGUCGGC       GU GCCGAUGGG AUUAUAUUAAUUUCCGU GGC    U
    |||||||||||| ||| ||||  ||||||||       || ||||||||| ||||||||||||||||| |||
    CGGCUGCCCUUA UCA AUUA  GGCAGCCG       CA CGGCUGCCC UAAUAUAAUUAAGGGCA CCG    C
GCCC            A   -    GG        AACACUA  C         U                 A   AACA
Stem-loop sequence AAGCCGACGGGAAUAGUCUAAUUUCUGUCGGCCACCUAGUAGCCGAUGGGCAUUAUAUUAAUUUCCGUCGGCCAAGUCACAAGCCAACGGGAAUUAAUAUAAUUCCCGUCGGCCACAUCACAAGCCGACGGGGAUUAACUAAUUCCCGUCGGCCCCG