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BaseInfo

ncRNA ID novel_zma_miR5274
Species Zea mays
Class miRNA
Genome position Chr6:7016140-7016209 [-]
Reference genome RefGen_v4
Source SRR2287165
Length 24
Mature sequence(if miRNA) 47 - UGUUCUCUGGUCAGGCGCGGACGG - 70
Stem-loop(if miRNA) --UGU    UG      -       G   UG    A
     UCUC  GUCAGG CGCGGAC GUC  CGGC C
     ||||  |||||| ||||||| |||  |||| A
     GGAG  CGGUCC GCGCCUG CAG  GCUG G
GGAUC    CG      A       G   --    G
Stem-loop sequence UGUUCUCUGGUCAGGCGCGGACGGUCUGCGGCACAGGGUCGGACGGUCCGCGACCUGGCGCGAGGCUAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ096610.1
ncRNA:24   GGCAGGCGCGGACUGGUCUCUUGU   1
  |||||||||=|||||||||||=||
targets:27   CCGUCCGCGUCUGACCAGAGAGCA   50

2.5 TSA: Zea mays contig32265, mRNA sequence NA coding protein psRNATarget