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BaseInfo

ncRNA ID novel_zma_miR5273
Species Zea mays
Class miRNA
Genome position Chr8:22379133-22379191 [+]
Reference genome RefGen_v4
Source SRR1618882;SRR4237223;SRR5099742
Length 24
Mature sequence(if miRNA) 1 - GAUGCGGCCUCGUAGCUCGGCGCC - 24
Stem-loop(if miRNA) -GAUGC      -       G      CA
      GGCCUC GUAGCUC GCGCCA  G
      |||||| ||||||| ||||||  A
      CCGGAG CAUCGAG CGCGGU  U
AAAUAU      G       A      UC
Stem-loop sequence GAUGCGGCCUCGUAGCUCGGCGCCACAGAUCUUGGCGCAGAGCUACGGAGGCCUAUAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU962786.1
ncRNA:24   CCGCGGCUCGAUGCUCCGGCGUAG   1
  **=*|||=||*|||||||||||||
targets:159   CCUCCCGGGCGACGAGGCCGCAUC   182

2.0 Zea mays clone 245527 basic salivary proline-rich protein 2 mRNA, complete cds NA coding protein psRNATarget