Search result

BaseInfo

ncRNA ID novel_zma_miR5270
Species Zea mays
Class miRNA
Genome position Chr6:108870039-108870092 [-]
Reference genome RefGen_v4
Source SRR2287165
Length 24
Mature sequence(if miRNA) 1 - CUCUCUGGUCAGGCGCGGACGGUA - 24
Stem-loop(if miRNA) -- G       A      GU   -   G
  C GUCCGCG CCUGGC  GAG GCG C
  | ||||||| ||||||  ||| |||
  G CAGGCGC GGACUG  CUC CGU G
AU G       -      GU   U   G
Stem-loop sequence CGGUCCGCGACCUGGCGUGAGGCGGCGGUGCUCUCUGGUCAGGCGCGGACGGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ096610.1
ncRNA:24   AUGGCAGGCGCGGACUGGUCUCUC   1
  *||||||||||=||||||||||||
targets:25   GACCGUCCGCGUCUGACCAGAGAG   48

1.5 TSA: Zea mays contig32265, mRNA sequence NA coding protein psRNATarget