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BaseInfo

ncRNA ID	novel_zma_miR5267
Species	Zea mays
Class	miRNA
Genome position	Chr6:139824750-139824833 [-]
Reference genome	RefGen_v4
Source	SRR2287165;SRR5451006;SRR2089700
Length	24
Mature sequence(if miRNA)	1 - AAAGUACUCGGUAAAGAAGUCGUU - 24
Stem-loop(if miRNA)	--    A              ---  --GA U            A   CGAC UUUUUUGCCGAGUA   UC    G GGCACUUGGCAA G   |||| ||||||||||||||   ||    | |||||||||||| U   GCUG AAGAAAUGGCUCAU   AG    C CCGUGAGCUGUU C UU    -              GAA  AUAG -            U
Stem-loop sequence	CGACAUUUUUUGCCGAGUAUCGAGUGGCACUUGGCAAAGUCUUUGUCGAGUGCCCGAUAGAAAGUACUCGGUAAAGAAGUCGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU957858.1	ncRNA:24   UUGCUGAAGAAAUGGCUCAUGAAA   1   ||||=|||*||||||||||||||| targets:1235   AACGGCUUAUUUACCGAGUACUUU   1258 Target Full Sequence	1.0	Zea mays clone 1627310 mRNA sequence	NA	coding protein	psRNATarget
EU974507.1	ncRNA:24   UUGCUGAAGAAAUGGCUCAUGAAA   1   |||*=|||||||=||||||||||| targets:441   AACAGCUUCUUUGCCGAGUACUUU   464 Target Full Sequence	1.5	Zea mays clone 451014 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
HI407253.1	ncRNA:24   UUGCUGAAGAAAUGGCUCAUGAAA   1   ||*|*|||||||=||||||||||| targets:28   AAAGCCUUCUUUGCCGAGUACUUU   51 Target Full Sequence	1.5	Sequence 5378 from Patent EP2074227	NA	coding protein	psRNATarget
JB167714.1	ncRNA:24   UUGCUGAAGAAAUGGCUCAUGAAA   1   ||*|*|||||||=||||||||||| targets:28   AAAGCCUUCUUUGCCGAGUACUUU   51 Target Full Sequence	1.5	Sequence 5378 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239383.1	ncRNA:24   UUGCUGAAGAAAUGGCUCAUGAAA   1   ||*|*|||||||=||||||||||| targets:28   AAAGCCUUCUUUGCCGAGUACUUU   51 Target Full Sequence	1.5	Sequence 5378 from Patent EP2985353	NA	coding protein	psRNATarget