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BaseInfo

ncRNA ID novel_zma_miR5265
Species Zea mays
Class miRNA
Genome position Chr6:159746925-159746984 [-]
Reference genome RefGen_v4
Source SRR2287165
Length 21
Mature sequence(if miRNA) 1 - AGAACUAAAACUACUAAACCC - 21
Stem-loop(if miRNA) --                    -----    U
  GUUUAGUAGUUUUAGUUCUU     UGCU U
  ||||||||||||||||||||     |||| A
  CAAAUCAUCAAAAUCAAGAA     ACGA G
CC                    AUAAA    A
Stem-loop sequence GUUUAGUAGUUUUAGUUCUUUGCUUUAGAAGCAAAAUAAAGAACUAAAACUACUAAACCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020539466.1
ncRNA:21   CCCAAAUCAUCAAAAUCAAGA   1
  ***|||||||*||||||||||
targets:3485   UAUUUUAGUAAUUUUAGUUCU   3505

2.5 PREDICTED: Zea mays putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial (LOC103629949), transcript variant X1, mRNA NA coding protein psRNATarget