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BaseInfo

ncRNA ID novel_zma_miR5257
Species Zea mays
Class miRNA
Genome position Chr7:136981639-136981695 [-]
Reference genome RefGen_v4
Source SRR1618882
Length 24
Mature sequence(if miRNA) 1 - AAGCCAGCUGUUUGGACUGCUGCU - 24
Stem-loop(if miRNA) --A     -       AA A       UG
   AGUAG CCAAACA  U GGUUUGU  U
   ||||| |||||||  | |||||||  G
   UCGUC GGUUUGU  A CCGAAUA  G
UCG     A       CG -       UC
Stem-loop sequence AAGUAGCCAAACAAAUAGGUUUGUUGUGGCUAUAAGCCAGCUGUUUGGACUGCUGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT055738.2
ncRNA:24   UCG---UCGUCAGGUUUGUCGACCGAA   1
  |||---|||||||||||||||||||||
targets:831   AGCUACAGCAGUCCAAACAGCUGGCUU   857

0.0 Zea mays full-length cDNA clone ZM_BFb0156L24 mRNA, complete cds NA coding protein psRNATarget
EU948892.1
ncRNA:24   UCGUCGUCAGGUUUGUCGACCGAA   1
  *|||*|||||==||||||||||||
targets:196   UGCAACAGUCUGAACAGCUGGCUU   219

2.5 Zea mays clone 389061 mRNA sequence NA coding protein psRNATarget