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BaseInfo

ncRNA ID novel_zma_miR5255
Species Zea mays
Class miRNA
Genome position Chr10:15007358-15007452 [+]
Reference genome RefGen_v4
Source SRR2287165
Length 24
Mature sequence(if miRNA) 72 - CUGGGCUCGGACAGGAAACUAGGC - 95
Stem-loop(if miRNA) UUGG   CG UCCGAGCCCGGCACGACCCGCUUCUAUGCGGGCCUGGG
    GCC  G                                      C
    |||  |                                      C
    CGG  C                                      G
----   AU AAAGGACAGGCUCGGGUCGGGCGAACAAGCACGGCCCG
Stem-loop sequence UUGGGCCCGGUCCGAGCCCGGCACGACCCGCUUCUAUGCGGGCCUGGGCCGGCCCGGCACGAACAAGCGGGCUGGGCUCGGACAGGAAACUAGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ072191.1
ncRNA:24   CGGAUCAAAGGACAGGCUCGGGUC   1
  |||||*||||||||||||||||=|
targets:54   GCCUAAUUUCCUGUCCGAGCCCGG   77

2.5 TSA: Zea mays contig07828, mRNA sequence NA coding protein psRNATarget