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BaseInfo

ncRNA ID	novel_zma_miR5245
Species	Zea mays
Class	miRNA
Genome position	Chr5:2583308-2583395 [+]
Reference genome	RefGen_v4
Source	SRR2287165
Length	24
Mature sequence(if miRNA)	1 - CCAACGGUGCUGUGUCAGGGGGUU - 24
Stem-loop(if miRNA)	--                          -         UCUUU   A   CCAACGGUGCUGUGUCAGGGGGUUUU GUAAAAUGU     GCA C   |||||||||||||||||||||||||| |||||||||     |||   GGUUGCCACGACGCAGUCCCCCAAAA CAUUUUACA     UGU U UA                          A         -----   C
Stem-loop sequence	CCAACGGUGCUGUGUCAGGGGGUUUUGUAAAAUGUUCUUUGCAACUCUGUACAUUUUACAAAAACCCCCUGACGCAGCACCGUUGGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008681149.2	ncRNA:24   UUGGGGGACUGUGUCGUGGCAACC   1   |||||||||||||||||||||||| targets:667   AACCCCCUGACACAGCACCGUUGG   690 Target Full Sequence	0.0	PREDICTED: Zea mays mini zinc finger protein 1 (LOC103654311), mRNA	NA	coding protein	psRNATarget
XM_008660409.2	ncRNA:24   UUGGGGGACUGUGUCGUGGCAACC   1   |||||||||||||||||||||||| targets:1343   AACCCCCUGACACAGCACCGUUGG   1366 Target Full Sequence	0.0	PREDICTED: Zea mays homeodomain-leucine zipper transcription factor TaHDZipI-1 (LOC100282963), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020539811.1	ncRNA:24   UUGGGGGACUGUGUCGUGGCAACC   1   |||||||||||=|||||||||||| targets:1658   AACCCCCUGACGCAGCACCGUUGG   1681 Target Full Sequence	1.5	PREDICTED: Zea mays anthocyanidin 3-O-glucoside 6''-O-acyltransferase (LOC103631128), mRNA	NA	coding protein	psRNATarget