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BaseInfo

ncRNA ID	novel_zma_miR5235
Species	Zea mays
Class	miRNA
Genome position	Chr7:160674524-160674583 [+]
Reference genome	RefGen_v4
Source	SRR1618882;SRR1618883;SRR1743455;SRR1745812;SRR4237220;SRR4237221;SRR4237223;SRR4237224;SRR4237225;SRR4237226;SRR4237227
Length	21
Mature sequence(if miRNA)	1 - CGUCCCCUACCUGGCGCGCCA - 21
Stem-loop(if miRNA)	--CG   C         G   CAAAUGUCGGU   A     UCC CUACCUGGC CGC           GGG A     ||| ||||||||| |||           |||     AGG GGUGGGCCG GCG           UCC A CGUA   U         -   -----------   U
Stem-loop sequence	CGUCCCCUACCUGGCGCGCCAAAUGUCGGUGGGAAAUCCUGCGGCCGGGUGGUGGAAUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT017984.1	ncRNA:21   ACCGCGCGGUCCAUCCCCUGC   1   ||||||||||||||||||||* targets:387   UGGCGCGCCAGGUAGGGGACU   407 Target Full Sequence	1.0	Zea mays clone EL01N0525E01.c mRNA sequence	NA	coding protein	psRNATarget
XM_020539680.1	ncRNA:21   ACCGCGCGGUCCAUCCCCUGC   1   ||||||||||||||||*|||| targets:1960   UGGCGCGCCAGGUAGGAGACG   1980 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109940245 (LOC109940245), mRNA	NA	coding protein	psRNATarget
BT018612.1	ncRNA:21   ACCGCGCGGUCCAUCCCCUGC   1   ||||||||||||||||||*|* targets:384   UGGCGCGCCAGGUAGGGGCCU   404 Target Full Sequence	2.5	Zea mays clone EL01N0501C03.d mRNA sequence	NA	coding protein	psRNATarget
EU940899.1	ncRNA:21   ACCGCGCGGUCCAUCCCCUGC   1   ||||||||||||||||||*|* targets:1981   UGGCGCGCCAGGUAGGGGCCU   2001 Target Full Sequence	2.5	Zea mays clone 1168123 mRNA sequence	NA	coding protein	psRNATarget
XM_020541624.1	ncRNA:21   ACCGCGCGGUCCAUCCCCUGC   1   ||||||||||||||||||*|* targets:1975   UGGCGCGCCAGGUAGGGGCCU   1995 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103644648 (LOC103644648), mRNA	NA	coding protein	psRNATarget