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BaseInfo

ncRNA ID novel_zma_miR5226
Species Zea mays
Class miRNA
Genome position Chr10:112494208-112494290 [+]
Reference genome RefGen_v4
Source SRR2287165;SRR5451003;SRR5451005
Length 24
Mature sequence(if miRNA) 60 - GCCUUAUUUUCGGCGGUUUCUGGC - 83
Stem-loop(if miRNA) --                  -     AAG             
  CAGGAACCGCCGAAAAUA GGCCU   GCCGCCGAAAAUAG
  |||||||||||||||||| |||||   |||||||||||||C
  GUCUUUGGCGGCUUUUAU CCGGA   UGGCGGCUUUUAUU
CG                  U     -AA             
Stem-loop sequence CAGGAACCGCCGAAAAUAGGCCUAAGGCCGCCGAAAAUAGCUUAUUUUCGGCGGUAAAGGCCUUAUUUUCGGCGGUUUCUGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB167665.1
ncRNA:24   CGGUCUUUGGCGGCUUUUAUUCCG   1
  ||||*||=||||||||||||||||
targets:2   GCCAAAAGCCGCCGAAAAUAAGGC   25

1.0 Sequence 5329 from Patent EP2559767 NA coding protein psRNATarget
HI407204.1
ncRNA:24   CGGUCUUUGGCGGCUUUUAUUCCG   1
  ||||*||=||||||||||||||||
targets:2   GCCAAAAGCCGCCGAAAAUAAGGC   25

1.0 Sequence 5329 from Patent EP2074227 NA coding protein psRNATarget
LQ239334.1
ncRNA:24   CGGUCUUUGGCGGCUUUUAUUCCG   1
  ||||*||=||||||||||||||||
targets:2   GCCAAAAGCCGCCGAAAAUAAGGC   25

1.0 Sequence 5329 from Patent EP2985353 NA coding protein psRNATarget