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BaseInfo

ncRNA ID novel_zma_miR5225
Species Zea mays
Class miRNA
Genome position Chr4:36530327-36530393 [-]
Reference genome RefGen_v4
Source SRR2287165;SRR5451004
Length 24
Mature sequence(if miRNA) 1 - AUUUUGGAAUGAGUGGAUGACGGA - 24
Stem-loop(if miRNA) --G       G   G         A    GUCGC
   GUCGUCC AUU AUUUCGAGG AUGG     G
   ||||||| ||| ||||||||| ||||
   CAGUAGG UGA UAAGGUUUU UGUC     G
AGG       -   G         A    AAAUU
Stem-loop sequence GGUCGUCCGAUUGAUUUCGAGGAAUGGGUCGCGGUUAAACUGUAUUUUGGAAUGAGUGGAUGACGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020550362.1
ncRNA:24   AGGCAGUAGGUGAGUAAGGUUUUA   1
  ||||||||||||||=|||||||||
targets:692   UCCGUCAUCCACUCGUUCCAAAAU   715

1.5 PREDICTED: Zea mays protein ALP1-like (LOC103650735), mRNA NA coding protein psRNATarget