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BaseInfo

ncRNA ID osa-miRf10119-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 25
Mature sequence(if miRNA) NA - ACAGUCCUUGAGGAGGUACCAUGAG - NA
Stem-loop(if miRNA)              G                   A       UUUUUUCUAU      UUUA     UCUUGAUACC
GAGUAAUUUUACA UCCUUGAGGAGGUACCAUG GGUACUA          UGUAAA    GUAUC          U
||||||||||||| ||||||||||||||||||| |||||||          ||||||    |||||          A
CUCGUUAAAAUGU AGGAACUCCUCCAUGGUAC CCAUGGU          ACAUUU    CCAUG          G
             A                   C       UUUUUAAAUU      UAAA     GACUAUCAUG
Stem-loop sequence GAGUAAUUUUACAGUCCUUGAGGAGGUACCAUGAGGUACUAUUUUUUCUAUUGUAAAUUUAGUAUCUCUUGAUACCUAGGUACUAUCAGGUACCAAAUUUUACAUUAAAUUUUUUGGUACCCCAUGGUACCUCCUCAAGGAAUGUAAAAUUGCUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288182.1
ncRNA:25   GAGUACCAUGGAGGAGUUCCUGACA   1
  |||||||||=||||||||||||*||
targets:1417   CUCAUGGUAUCUCCUCAAGGACCGU   1441

2.5 Oryza sativa Japonica Group cDNA, clone: J090005J12, full insert sequence NA coding protein psRNATarget
XM_015757723.1
ncRNA:25   GAGUACCAUGGAGGAGUUCCUGACA   1
  ***||||||||||||||||*|||||
targets:541   AAAAUGGUACCUCCUCAAGAACUGU   565

1.5 PREDICTED: Oryza sativa Japonica Group TD and POZ domain-containing protein 4 (LOC9271695), mRNA TD and POZ domain-containing protein 4(LOC9271695) coding protein psRNATarget
AK318585.1
ncRNA:25   GAGUACCAUGGAGGAGUUCCUGACA   1
  **=||||||=||||||||*||||||
targets:116   AAUAUGGUAUCUCCUCAAUGACUGU   140

2.5 Oryza sativa Japonica Group cDNA, clone: J100013F15, full insert sequence NA coding protein psRNATarget