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BaseInfo

ncRNA ID	novel_zma_miR5219
Species	Zea mays
Class	miRNA
Genome position	Chr4:171263202-171263360 [-]
Reference genome	RefGen_v4
Source	SRR2287165;SRR5451005
Length	24
Mature sequence(if miRNA)	1 - GCCUUAUAUACUAGGACGGAGGGA - 24
Stem-loop(if miRNA)	--     A   C         U         G  -CUG    AAAAACUAAAAAAA    UCUAUAUUACUGCAUCAAUGUACGC   CCUCC UCC AGUAUAUAA GCAUAACCA CU    GUUC              UGUA                         A   ||||| ||| ||||||||| ||||||||| ||    ||||              ||||                         U   GGAGG AGG UCAUAUAUU CGUAUUGGU GA    UAAG              GAGU                         G AG     C   A         C         -  AAAA    ----------AUCA    AUUAAAUUCCACACUAGAGAGAUCU
Stem-loop sequence	CCUCCAUCCCAGUAUAUAAUGCAUAACCAGCUCUGGUUCAAAAACUAAAAAAAUGUAUCUAUAUUACUGCAUCAAUGUACGCAUGUCUAGAGAGAUCACACCUUAAAUUAUGAGACUAGAAUAAAAAGUGGUUAUGCCUUAUAUACUAGGACGGAGGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU941116.1	ncRNA:24   AGGGAGGCAGGAUCAUAUAUUCCG   1   ||||||||||||||*||||||||| targets:560   UCCCUCCGUCCUAGGAUAUAAGGC   583 Target Full Sequence	1.5	Zea mays clone 1291101 mRNA sequence	NA	coding protein	psRNATarget
EU974289.1	ncRNA:24   AGGGAGGCAGGAUCAUAUAUUCCG   1   |||||||||||*|||||||||||| targets:196   UCCCUCCGUCCCAGUAUAUAAGGC   219 Target Full Sequence	1.5	Zea mays clone 445101 mRNA sequence	NA	coding protein	psRNATarget
XM_020546407.1	ncRNA:24   AGGGAGGCAGGAUCAUAUAUUCCG   1   |||||=|||||*|||||||||||| targets:781   UCCCUUCGUCCCAGUAUAUAAGGC   804 Target Full Sequence	2.5	PREDICTED: Zea mays zinc finger BED domain-containing protein DAYSLEEPER-like (LOC109943429), mRNA	NA	coding protein	psRNATarget