| ncRNA ID | novel_zma_miR5215 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr4:193816804-193817015 [-] |
| Reference genome | RefGen_v4 |
| Source | SRR2287165;SRR2089698;SRR2089701;SRR2089705 |
| Length | 24 |
| Mature sequence(if miRNA) | 189 - UAGAGAAUCGUGUAGAGACGAGCU - 212 |
| Stem-loop(if miRNA) |
-- A U AG A CUC U --G CAC -AA U A ---- CAU UAGAGA UCGUG AGAGACG CUCUUC CGAAGAG GUCUCUUGU UUUU CACUUA UCCCU AAACCCCUCAAG GACUUCAUA UUA GGG G |||||| ||||| ||||||| |||||| ||||||| ||||||||| |||| |||||| ||||| |||||||||||| ||||||||| ||| ||| U AUCUCU AGCAC UCUCUGU GAGAAG GUUUCUC CAGAGAACA AAAA GUGAAU AGGGA UUUGGGGAGUUU CUGGGGUAU AAU CCC G AU G U CU C CCA U AAA --C AUC - - UUAC AAC |
| Stem-loop sequence | UAGAGAAUCGUGUAGAGACGAGCUCUUCACGAAGAGCUCGUCUCUUGUUUUUUGCACUUACACUCCCUAAAAACCCCUCAAGUGACUUCAUAAUUAGGGCAUGUGCAACCCCAUUUAAUAUGGGGUCUUUGAGGGGUUUCUAAGGGACUAAGUGAAAAAAAUACAAGAGACACCCUCUUUGCGAAGAGUCUGUCUCUUCACGAGUCUCUAUA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_008663725.2 |
|
1.5 | PREDICTED: Zea mays scramblase family protein (LOC100282688), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
| EU947946.1 |
|
1.5 | Zea mays clone 367090 mRNA sequence | NA | coding protein | psRNATarget |