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BaseInfo

ncRNA ID novel_zma_miR5209
Species Zea mays
Class miRNA
Genome position Chr4:242159734-242159828 [+]
Reference genome RefGen_v4
Source SRR2287165
Length 24
Mature sequence(if miRNA) 72 - AAGAAACGGAGGGAGUACUAAUUA - 95
Stem-loop(if miRNA) ---AUUA                                        A
       UACUCCCUCCGUUUCUUUUUAUUUGUCGCUGGAUAGUGCA A
       ||||||||||||||||||||||||||||||||||||||||
       AUGAGGGAGGCAAAGAAAAAUAAACAGCGACCUAUCACGU A
AUUAAUC                                        U
Stem-loop sequence AUUAUACUCCCUCCGUUUCUUUUUAUUUGUCGCUGGAUAGUGCAAAAUUGCACUAUCCAGCGACAAAUAAAAAGAAACGGAGGGAGUACUAAUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB163740.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  ||||||||||||||||||||||||
targets:4   UAAUUAGUACUCCCUCCGUUUCUU   27

0.0 Sequence 1404 from Patent EP2559767 NA coding protein psRNATarget
HI403279.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  ||||||||||||||||||||||||
targets:4   UAAUUAGUACUCCCUCCGUUUCUU   27

0.0 Sequence 1404 from Patent EP2074227 NA coding protein psRNATarget
LQ235409.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  ||||||||||||||||||||||||
targets:4   UAAUUAGUACUCCCUCCGUUUCUU   27

0.0 Sequence 1404 from Patent EP2985353 NA coding protein psRNATarget
XM_008647346.2
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  ||||||*|||||||||||||||||
targets:134   UAAUUAAUACUCCCUCCGUUUCUU   157

1.0 PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA NA coding protein psRNATarget
HI408623.1
ncRNA:24   AUUAAUCAUGAGGGAGG-CAAAGAA   1
  ||=||||||||||||||-|||||||
targets:1   UAGUUAGUACUCCCUCCAGUUUCUU   25

3.0 Sequence 6748 from Patent EP2074227 NA coding protein psRNATarget
JB169084.1
ncRNA:24   AUUAAUCAUGAGGGAGG-CAAAGAA   1
  ||=||||||||||||||-|||||||
targets:1   UAGUUAGUACUCCCUCCAGUUUCUU   25

3.0 Sequence 6748 from Patent EP2559767 NA coding protein psRNATarget
LQ240753.1
ncRNA:24   AUUAAUCAUGAGGGAGG-CAAAGAA   1
  ||=||||||||||||||-|||||||
targets:1   UAGUUAGUACUCCCUCCAGUUUCUU   25

3.0 Sequence 6748 from Patent EP2985353 NA coding protein psRNATarget
XM_020537567.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  ||=|||*|||||||||||||||||
targets:1445   UAGUUAUUACUCCCUCCGUUUCUU   1468

1.0 PREDICTED: Zea mays MADS2 (zmm2), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008664463.2
ncRNA:24   AUUA---AUCAUGAGGGAGGCAAAGAA   1
  |=||---||||||||||||=|||||||
targets:83   UGAUAUAUAGUACUCCCUCUGUUUCUU   109

1.5 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008664460.2
ncRNA:24   AUUA---AUCAUGAGGGAGGCAAAGAA   1
  |=||---||||||||||||=|||||||
targets:103   UGAUAUAUAGUACUCCCUCUGUUUCUU   129

1.5 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020542418.1
ncRNA:24   AUUA-AUCAUGAGGGAGGCAAAGAA   1
  ||||-||*|||||||||||||||||
targets:1969   UAAUAUACUACUCCCUCCGUUUCUU   1993

1.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008658752.2
ncRNA:24   AUUA-AUCAUGAGGGAGGCAAAGAA   1
  ||||-||*|||||||||||||||||
targets:2036   UAAUAUACUACUCCCUCCGUUUCUU   2060

1.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X1, mRNA NA coding protein psRNATarget
HI407270.1
ncRNA:22   UAAUCAUGAGGGAGGCAAAGAA   1
  |||*||||||||||||||||||
targets:1   AUUUGUACUCCCUCCGUUUCUU   22

1.0 Sequence 5395 from Patent EP2074227 NA coding protein psRNATarget
JB167731.1
ncRNA:22   UAAUCAUGAGGGAGGCAAAGAA   1
  |||*||||||||||||||||||
targets:1   AUUUGUACUCCCUCCGUUUCUU   22

1.0 Sequence 5395 from Patent EP2559767 NA coding protein psRNATarget
LQ239400.1
ncRNA:22   UAAUCAUGAGGGAGGCAAAGAA   1
  |||*||||||||||||||||||
targets:1   AUUUGUACUCCCUCCGUUUCUU   22

1.0 Sequence 5395 from Patent EP2985353 NA coding protein psRNATarget
EU964901.1
ncRNA:24   AUUAAU-CAUGAGGGAGGCAAAGAA   1
  |*=|||-||||||||||||||||||
targets:489   UUGUUAAGUACUCCCUCCGUUUCUU   513

2.0 Zea mays clone 282450 mRNA sequence NA coding protein psRNATarget
NM_001151882.1
ncRNA:24   AUUAAU-CAUGAGGGAGGCAAAGAA   1
  |*=|||-||||||||||||||||||
targets:561   UUGUUAAGUACUCCCUCCGUUUCUU   585

2.0 Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA NA coding protein psRNATarget
EU974849.1
ncRNA:24   AUUAAU-CAUGAGGGAGGCAAAGAA   1
  |*=|||-||||||||||||||||||
targets:561   UUGUUAAGUACUCCCUCCGUUUCUU   585

2.0 Zea mays clone 459794 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
BT065536.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  |||--||||||||||||||||=||
targets:783   UAA--AGUACUCCCUCCGUUUUUU   804

1.5 Zea mays full-length cDNA clone ZM_BFb0224G04 mRNA, complete cds NA coding protein psRNATarget
NM_001156378.2
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  |||--||||||||||||||||=||
targets:841   UAA--AGUACUCCCUCCGUUUUUU   862

1.5 Zea mays ribulose-phosphate 3-epimerase (LOC100283478), mRNA NA coding protein psRNATarget
EU964879.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  |||--||||||||||||||||=||
targets:842   UAA--AGUACUCCCUCCGUUUUUU   863

1.5 Zea mays clone 282287 ribulose-phosphate 3-epimerase mRNA, complete cds NA coding protein psRNATarget
XM_020546695.1
ncRNA:24   AUUAAUC-AUGAGGGAGGCAAAGAA   1
  *|||||*-|||||||||||||||||
targets:2197   AAAUUAUAUACUCCCUCCGUUUCUU   2221

3.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X13, mRNA NA coding protein psRNATarget
XM_008666445.2
ncRNA:24   AUUAAUC-AUGAGGGAGGCAAAGAA   1
  *|||||*-|||||||||||||||||
targets:2197   AAAUUAUAUACUCCCUCCGUUUCUU   2221

3.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X14, mRNA NA coding protein psRNATarget
XM_020546694.1
ncRNA:24   AUUAAUC-AUGAGGGAGGCAAAGAA   1
  *|||||*-|||||||||||||||||
targets:2197   AAAUUAUAUACUCCCUCCGUUUCUU   2221

3.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X12, mRNA NA coding protein psRNATarget
XM_020546685.1
ncRNA:24   AUUAAUC-AUGAGGGAGGCAAAGAA   1
  *|||||*-|||||||||||||||||
targets:2218   AAAUUAUAUACUCCCUCCGUUUCUU   2242

3.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546687.1
ncRNA:24   AUUAAUC-AUGAGGGAGGCAAAGAA   1
  *|||||*-|||||||||||||||||
targets:2218   AAAUUAUAUACUCCCUCCGUUUCUU   2242

3.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020546686.1
ncRNA:24   AUUAAUC-AUGAGGGAGGCAAAGAA   1
  *|||||*-|||||||||||||||||
targets:2218   AAAUUAUAUACUCCCUCCGUUUCUU   2242

3.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546691.1
ncRNA:24   AUUAAUC-AUGAGGGAGGCAAAGAA   1
  *|||||*-|||||||||||||||||
targets:2197   AAAUUAUAUACUCCCUCCGUUUCUU   2221

3.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X9, mRNA NA coding protein psRNATarget
XM_020546689.1
ncRNA:24   AUUAAUC-AUGAGGGAGGCAAAGAA   1
  *|||||*-|||||||||||||||||
targets:2156   AAAUUAUAUACUCCCUCCGUUUCUU   2180

3.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020546683.1
ncRNA:24   AUUAAUC-AUGAGGGAGGCAAAGAA   1
  *|||||*-|||||||||||||||||
targets:2211   AAAUUAUAUACUCCCUCCGUUUCUU   2235

3.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546684.1
ncRNA:24   AUUAAUC-AUGAGGGAGGCAAAGAA   1
  *|||||*-|||||||||||||||||
targets:2236   AAAUUAUAUACUCCCUCCGUUUCUU   2260

3.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546692.1
ncRNA:24   AUUAAUC-AUGAGGGAGGCAAAGAA   1
  *|||||*-|||||||||||||||||
targets:2197   AAAUUAUAUACUCCCUCCGUUUCUU   2221

3.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X10, mRNA NA coding protein psRNATarget
XM_020546693.1
ncRNA:24   AUUAAUC-AUGAGGGAGGCAAAGAA   1
  *|||||*-|||||||||||||||||
targets:2135   AAAUUAUAUACUCCCUCCGUUUCUU   2159

3.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X11, mRNA NA coding protein psRNATarget
XM_020546615.1
ncRNA:24   AUUA--AUCAUGAGGGAGGCAAAGAA   1
  *|||--||*|||||||||||||||||
targets:2787   GAAUGCUAUUACUCCCUCCGUUUCUU   2812

1.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546614.1
ncRNA:24   AUUA--AUCAUGAGGGAGGCAAAGAA   1
  *|||--||*|||||||||||||||||
targets:2804   GAAUGCUAUUACUCCCUCCGUUUCUU   2829

1.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546612.1
ncRNA:24   AUUA--AUCAUGAGGGAGGCAAAGAA   1
  *|||--||*|||||||||||||||||
targets:2910   GAAUGCUAUUACUCCCUCCGUUUCUU   2935

1.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546613.1
ncRNA:24   AUUA--AUCAUGAGGGAGGCAAAGAA   1
  *|||--||*|||||||||||||||||
targets:3689   GAAUGCUAUUACUCCCUCCGUUUCUU   3714

1.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA NA coding protein psRNATarget
EZ517015.1
ncRNA:24   AUUA-AUCAUGAGGGAGGCAAAGAA   1
  **||-|=|||||||||||||||=||
targets:48   CUAUAUGGUACUCCCUCCGUUUUUU   72

2.5 TSA: Zea mays cultivar W22 CL412Contig1.betc, mRNA sequence NA coding protein psRNATarget
BT054612.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  |***|||||||||=||||||||||
targets:1357   UCUGUAGUACUCCUUCCGUUUCUU   1380

1.5 Zea mays full-length cDNA clone ZM_BFc0190P19 mRNA, complete cds NA coding protein psRNATarget
XM_008674191.2
ncRNA:24   AUUAAUC-AUGAGGGAGGCAAAGAA   1
  **=||=|-|||||||||||||||||
targets:1143   AUGUUGGAUACUCCCUCCGUUUCUU   1167

3.0 PREDICTED: Zea mays putative protein S-acyltransferase 16 (LOC100273154), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008656936.2
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  *||--|||||||||||||||||||
targets:159   AAA--AGUACUCCCUCCGUUUCUU   180

0.0 PREDICTED: Zea mays putative HLH DNA-binding domain superfamily protein (LOC100381500), transcript variant X1, mRNA NA coding protein psRNATarget
LQ235486.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  |**||*||||||||||||||||||
targets:4   UUCUUCGUACUCCCUCCGUUUCUU   27

1.0 Sequence 1481 from Patent EP2985353 NA coding protein psRNATarget
HI403356.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  |**||*||||||||||||||||||
targets:4   UUCUUCGUACUCCCUCCGUUUCUU   27

1.0 Sequence 1481 from Patent EP2074227 NA coding protein psRNATarget
JB163817.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  |**||*||||||||||||||||||
targets:4   UUCUUCGUACUCCCUCCGUUUCUU   27

1.0 Sequence 1481 from Patent EP2559767 NA coding protein psRNATarget
BT037092.1
ncRNA:24   AUUA-AUCAUGAGGGAGGCAAAGAA   1
  *=||-|||||||||*||||||||||
targets:1076   CGAUAUAGUACUCCAUCCGUUUCUU   1100

1.5 Zea mays full-length cDNA clone ZM_BFb0154F16 mRNA, complete cds NA coding protein psRNATarget
NM_001143050.1
ncRNA:24   AUUA-AUCAUGAGGGAGGCAAAGAA   1
  *=||-|||||||||*||||||||||
targets:1076   CGAUAUAGUACUCCAUCCGUUUCUU   1100

1.5 Zea mays uncharacterized LOC100216637 (LOC100216637), mRNA NA coding protein psRNATarget
XM_020544903.1
ncRNA:24   AUUA-AUCAUGAGGGAGGCAAAGAA   1
  *=||-|||||||||*||||||||||
targets:3133   CGAUAUAGUACUCCAUCCGUUUCUU   3157

1.5 PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020544902.1
ncRNA:24   AUUA-AUCAUGAGGGAGGCAAAGAA   1
  *=||-|||||||||*||||||||||
targets:3142   CGAUAUAGUACUCCAUCCGUUUCUU   3166

1.5 PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X1, mRNA NA coding protein psRNATarget
LQ242091.1
ncRNA:20   AUCAUGAGGGAGGCAAAGAA   1
  *|||||||||||||||||||
targets:1   AAGUACUCCCUCCGUUUCUU   20

0.0 Sequence 8086 from Patent EP2985353 NA coding protein psRNATarget
JB170422.1
ncRNA:20   AUCAUGAGGGAGGCAAAGAA   1
  *|||||||||||||||||||
targets:1   AAGUACUCCCUCCGUUUCUU   20

0.0 Sequence 8086 from Patent EP2559767 NA coding protein psRNATarget
LQ241075.1
ncRNA:20   AUCAUGAGGGAGGCAAAGAA   1
  *|||||||||||||||||||
targets:1   AAGUACUCCCUCCGUUUCUU   20

0.0 Sequence 7070 from Patent EP2985353 NA coding protein psRNATarget
JB169406.1
ncRNA:20   AUCAUGAGGGAGGCAAAGAA   1
  *|||||||||||||||||||
targets:1   AAGUACUCCCUCCGUUUCUU   20

0.0 Sequence 7070 from Patent EP2559767 NA coding protein psRNATarget
HI409961.1
ncRNA:20   AUCAUGAGGGAGGCAAAGAA   1
  *|||||||||||||||||||
targets:1   AAGUACUCCCUCCGUUUCUU   20

0.0 Sequence 8086 from Patent EP2074227 NA coding protein psRNATarget
HI408945.1
ncRNA:20   AUCAUGAGGGAGGCAAAGAA   1
  *|||||||||||||||||||
targets:1   AAGUACUCCCUCCGUUUCUU   20

0.0 Sequence 7070 from Patent EP2074227 NA coding protein psRNATarget
HI407230.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAG-AA   1
  |||--|||||||||||||||||-||
targets:1   UAA--AGUACUCCCUCCGUUUCGUU   23

3.0 Sequence 5355 from Patent EP2074227 NA coding protein psRNATarget
JB167691.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAG-AA   1
  |||--|||||||||||||||||-||
targets:1   UAA--AGUACUCCCUCCGUUUCGUU   23

3.0 Sequence 5355 from Patent EP2559767 NA coding protein psRNATarget
LQ239360.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAG-AA   1
  |||--|||||||||||||||||-||
targets:1   UAA--AGUACUCCCUCCGUUUCGUU   23

3.0 Sequence 5355 from Patent EP2985353 NA coding protein psRNATarget
NM_001156655.1
ncRNA:24   AU-UA---AUCAUGAGGGAGGCAAAGAA   1
  ||-||---||*|||||||||||||||||
targets:1277   UAUAUCUCUAAUACUCCCUCCGUUUCUU   1304

1.0 Zea mays wax synthase (LOC100283756), mRNA NA coding protein psRNATarget
EU965844.1
ncRNA:24   AU-UA---AUCAUGAGGGAGGCAAAGAA   1
  ||-||---||*|||||||||||||||||
targets:1277   UAUAUCUCUAAUACUCCCUCCGUUUCUU   1304

1.0 Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds NA coding protein psRNATarget
EU955357.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  |*=**|||||||||||||||||||
targets:1241   UCGGAAGUACUCCCUCCGUUUCUU   1264

0.0 Zea mays clone 1529261 senescence-inducible chloroplast stay-green protein 1 mRNA, complete cds; nuclear gene for chloroplast product NA coding protein psRNATarget
NM_001112301.2
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  |*=**|||||||||||||||||||
targets:1303   UCGGAAGUACUCCCUCCGUUUCUU   1326

0.0 Zea mays senescence-inducible chloroplast stay-green protein 2 (SGR2), mRNA NA coding protein psRNATarget
HI403399.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  *=|||**|||||||||||||||||
targets:4   AGAUUCAUACUCCCUCCGUUUCUU   27

2.0 Sequence 1524 from Patent EP2074227 NA coding protein psRNATarget
LQ235529.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  *=|||**|||||||||||||||||
targets:4   AGAUUCAUACUCCCUCCGUUUCUU   27

2.0 Sequence 1524 from Patent EP2985353 NA coding protein psRNATarget
JB163860.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  *=|||**|||||||||||||||||
targets:4   AGAUUCAUACUCCCUCCGUUUCUU   27

2.0 Sequence 1524 from Patent EP2559767 NA coding protein psRNATarget
LQ235397.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  *|||*|*||=||||||||||||||
targets:93   AAAUAAAUAUUCCCUCCGUUUCUU   116

2.0 Sequence 1392 from Patent EP2985353 NA coding protein psRNATarget
HI403267.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  *|||*|*||=||||||||||||||
targets:93   AAAUAAAUAUUCCCUCCGUUUCUU   116

2.0 Sequence 1392 from Patent EP2074227 NA coding protein psRNATarget
JB163728.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  *|||*|*||=||||||||||||||
targets:93   AAAUAAAUAUUCCCUCCGUUUCUU   116

2.0 Sequence 1392 from Patent EP2559767 NA coding protein psRNATarget
EU943815.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  ||*|||*||||||||||||||*||
targets:529   UAUUUACUACUCCCUCCGUUUGUU   552

2.5 Zea mays clone 1688394 mRNA sequence NA coding protein psRNATarget
HI403294.1
ncRNA:24   AUUAAUC---AUGAGGGAGGCAAAGAA   1
  **||*||---|||||||||||||||||
targets:1   ACAUGAGAACUACUCCCUCCGUUUCUU   27

3.0 Sequence 1419 from Patent EP2074227 NA coding protein psRNATarget
LQ235424.1
ncRNA:24   AUUAAUC---AUGAGGGAGGCAAAGAA   1
  **||*||---|||||||||||||||||
targets:1   ACAUGAGAACUACUCCCUCCGUUUCUU   27

3.0 Sequence 1419 from Patent EP2985353 NA coding protein psRNATarget
JB163755.1
ncRNA:24   AUUAAUC---AUGAGGGAGGCAAAGAA   1
  **||*||---|||||||||||||||||
targets:1   ACAUGAGAACUACUCCCUCCGUUUCUU   27

3.0 Sequence 1419 from Patent EP2559767 NA coding protein psRNATarget
BT062074.1
ncRNA:24   AU-UAAUCAUGAGGGAGGCAAAGAA   1
  ||-=*||*|||||||||||||||||
targets:1129   UACGCUACUACUCCCUCCGUUUCUU   1153

1.0 Zea mays full-length cDNA clone ZM_BFb0212O02 mRNA, complete cds NA coding protein psRNATarget
XM_008682276.2
ncRNA:24   AU-UAAUCAUGAGGGAGGCAAAGAA   1
  ||-=*||*|||||||||||||||||
targets:1212   UACGCUACUACUCCCUCCGUUUCUU   1236

1.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X2, mRNA NA coding protein psRNATarget
EU973774.1
ncRNA:24   AU-UAAUCAUGAGGGAGGCAAAGAA   1
  ||-=*||*|||||||||||||||||
targets:1227   UACGCUACUACUCCCUCCGUUUCUU   1251

1.0 Zea mays clone 410704 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682289.2
ncRNA:24   AU-UAAUCAUGAGGGAGGCAAAGAA   1
  ||-=*||*|||||||||||||||||
targets:1241   UACGCUACUACUCCCUCCGUUUCUU   1265

1.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X6, mRNA NA coding protein psRNATarget
NM_001158647.2
ncRNA:24   AU-UAAUCAUGAGGGAGGCAAAGAA   1
  ||-=*||*|||||||||||||||||
targets:1293   UACGCUACUACUCCCUCCGUUUCUU   1317

1.0 Zea mays F-box domain containing protein (LOC100285757), mRNA NA coding protein psRNATarget
EU973763.1
ncRNA:24   AU-UAAUCAUGAGGGAGGCAAAGAA   1
  ||-=*||*|||||||||||||||||
targets:1295   UACGCUACUACUCCCUCCGUUUCUU   1319

1.0 Zea mays clone 409560 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682282.2
ncRNA:24   AU-UAAUCAUGAGGGAGGCAAAGAA   1
  ||-=*||*|||||||||||||||||
targets:1401   UACGCUACUACUCCCUCCGUUUCUU   1425

1.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X3, mRNA NA coding protein psRNATarget
NM_001148943.2
ncRNA:24   AUUAAUC-AUGAGGGAGGCAAAGAA   1
  |=|--||-|||||||||||||||||
targets:1537   UGA--AGAUACUCCCUCCGUUUCUU   1559

2.0 Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA NA coding protein psRNATarget
XM_020553332.1
ncRNA:24   AU-UAAUCAUGAGGGAGGCAAAGAA   1
  ||-=*||*|||||||||||||||||
targets:1990   UACGCUACUACUCCCUCCGUUUCUU   2014

1.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020553342.1
ncRNA:24   AU-UAAUCAUGAGGGAGGCAAAGAA   1
  ||-=*||*|||||||||||||||||
targets:2021   UACGCUACUACUCCCUCCGUUUCUU   2045

1.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020553327.1
ncRNA:24   AU-UAAUCAUGAGGGAGGCAAAGAA   1
  ||-=*||*|||||||||||||||||
targets:2103   UACGCUACUACUCCCUCCGUUUCUU   2127

1.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020553339.1
ncRNA:24   AU-UAAUCAUGAGGGAGGCAAAGAA   1
  ||-=*||*|||||||||||||||||
targets:2134   UACGCUACUACUCCCUCCGUUUCUU   2158

1.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X5, mRNA NA coding protein psRNATarget
HI408570.1
ncRNA:20   AUCAUGAGGGAGGCAAAGAA   1
  ||*|||||||||||||||||
targets:1   UACUACUCCCUCCGUUUCUU   20

1.0 Sequence 6695 from Patent EP2074227 NA coding protein psRNATarget
LQ240700.1
ncRNA:20   AUCAUGAGGGAGGCAAAGAA   1
  ||*|||||||||||||||||
targets:1   UACUACUCCCUCCGUUUCUU   20

1.0 Sequence 6695 from Patent EP2985353 NA coding protein psRNATarget
JB169031.1
ncRNA:20   AUCAUGAGGGAGGCAAAGAA   1
  ||*|||||||||||||||||
targets:1   UACUACUCCCUCCGUUUCUU   20

1.0 Sequence 6695 from Patent EP2559767 NA coding protein psRNATarget
BT068381.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  *=||*|*|||||||||=|||||||
targets:1102   AGAUGAAUACUCCCUCUGUUUCUU   1125

2.5 Zea mays full-length cDNA clone ZM_BFb0135M15 mRNA, complete cds NA coding protein psRNATarget
EU956063.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  *=||*|*|||||||||=|||||||
targets:1055   AGAUGAAUACUCCCUCUGUUUCUU   1078

2.5 Zea mays clone 1556707 mRNA sequence NA coding protein psRNATarget
EU973028.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  *=||*|*|||||||||=|||||||
targets:1161   AGAUGAAUACUCCCUCUGUUUCUU   1184

2.5 Zea mays clone 391970 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
BT088158.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  *=||*|*|||||||||=|||||||
targets:1195   AGAUGAAUACUCCCUCUGUUUCUU   1218

2.5 Zea mays full-length cDNA clone ZM_BFc0038O11 mRNA, complete cds NA coding protein psRNATarget
XM_008671993.2
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  |***||*|||||||||||||||||
targets:1159   UUCAUAUUACUCCCUCCGUUUCUU   1182

1.0 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008656167.2
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  *=||*|*|||||||||=|||||||
targets:1214   AGAUGAAUACUCCCUCUGUUUCUU   1237

2.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008671992.2
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  |***||*|||||||||||||||||
targets:1265   UUCAUAUUACUCCCUCCGUUUCUU   1288

1.0 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA NA coding protein psRNATarget
BT035950.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  *=||*|*|||||||||=|||||||
targets:1395   AGAUGAAUACUCCCUCUGUUUCUU   1418

2.5 Zea mays full-length cDNA clone ZM_BFb0089G20 mRNA, complete cds NA coding protein psRNATarget
NM_001138729.1
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  *=||*|*|||||||||=|||||||
targets:1395   AGAUGAAUACUCCCUCUGUUUCUU   1418

2.5 Zea mays uncharacterized LOC100193630 (LOC100193630), mRNA NA coding protein psRNATarget
XM_008656166.2
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  *=||*|*|||||||||=|||||||
targets:1259   AGAUGAAUACUCCCUCUGUUUCUU   1282

2.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008677073.2
ncRNA:24   AUUAAUCAUGAGGGAGGCAAAGAA   1
  |=**||*|||||||||||||||||
targets:1520   UGCCUACUACUCCCUCCGUUUCUU   1543

1.0 PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA NA coding protein psRNATarget
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