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BaseInfo

ncRNA ID	novel_zma_miR5208
Species	Zea mays
Class	miRNA
Genome position	Chr1:290678010-290678103 [+]
Reference genome	RefGen_v4
Source	SRR1618882
Length	24
Mature sequence(if miRNA)	1 - AACGAAAUUUGGCCGUCCGUCUGC - 24
Stem-loop(if miRNA)	--   G    U   C G       --------         C    G   A   AAC AAAU UGG C UCCGUCU        GCCGUCGCA AUAU CAU U   ||| |||| ||| | |||||||        ||||||||| |||| |||   UUG UUUG ACC G AGGCAGA        UGGUAGUGU UAUA GUG U UU   A    U   A A       GGGACUGC         U    A   U
Stem-loop sequence	AACGAAAUUUGGCCGUCCGUCUGCCGUCGCACAUAUGCAUAUUUGUGAAUAUUUGUGAUGGUCGUCAGGGAGACGGAAGACCAUGUUUAGUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020550497.1	ncRNA:24   CGUCUGCCUGCCGGUUUAAAGCAA   1   *||-||||||*|||||||||=||| targets:1873   ACA-ACGGACAGCCAAAUUUUGUU   1895 Target Full Sequence	2.5	PREDICTED: Zea mays phosphatidylinositol/phosphatidylcholine transfer protein SFH6-like (LOC109944886), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020550496.1	ncRNA:24   CGUCUGCCUGCCGGUUUAAAGCAA   1   *||-||||||*|||||||||=||| targets:2006   ACA-ACGGACAGCCAAAUUUUGUU   2028 Target Full Sequence	2.5	PREDICTED: Zea mays phosphatidylinositol/phosphatidylcholine transfer protein SFH6-like (LOC109944886), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020550495.1	ncRNA:24   CGUCUGCCUGCCGGUUUAAAGCAA   1   *||-||||||*|||||||||=||| targets:2008   ACA-ACGGACAGCCAAAUUUUGUU   2030 Target Full Sequence	2.5	PREDICTED: Zea mays phosphatidylinositol/phosphatidylcholine transfer protein SFH6-like (LOC109944886), transcript variant X1, mRNA	NA	coding protein	psRNATarget