ncRNA ID | novel_zma_miR5197 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:164154709-164154834 [-] |
Reference genome | RefGen_v4 |
Source | SRR1583941 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CUGGUGCUCUUGAGGACGUUU - 21 |
Stem-loop(if miRNA) |
--    GA    C   - UU   A C  G     -------    UUCC     AUCUU          AU   AUGU  UCAA GAG G  AGU G CG AUCGA       CGUG    GCAUC     CAGUUGCUGG  C   ||||  |||| ||| |  ||| | || |||||       ||||    |||||     ||||||||||   UGCA  AGUU CUC U  UCA C GU UAGCU       GCAC    CGUGG     GUUAGCGACU  U UU    GG    -   G GG   C C  G     UAUAUCC    ----     ---CU          CU |
Stem-loop sequence | AUGUGAUCAACGAGGUUAGUAGCCGGAUCGACGUGUUCCGCAUCAUCUUCAGUUGCUGGAUCUUCUCAGCGAUUGUCGGUGCCACGCCUAUAUUCGAUGUGCCCACUGGUGCUCUUGAGGACGUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008672308.2 |
|
2.5 | PREDICTED: Zea mays scarecrow-like protein 32 (LOC103647799), mRNA | NA | coding protein | psRNATarget |