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BaseInfo

ncRNA ID	novel_zma_miR5193
Species	Zea mays
Class	miRNA
Genome position	Chr4:215113257-215113379 [+]
Reference genome	RefGen_v4
Source	SRR2287164;SRR2089702
Length	24
Mature sequence(if miRNA)	100 - AAAUACGAUUUGUAGUGGCGGUUU - 123
Stem-loop(if miRNA)	--          G      -         A C    C           C   ACUA         ACCGCCACUA AAAUCG AUUUCUACA G GGUU CUUAAGAAAAC GUC    GAAAUCA   |||||||||| |||||| ||||||||| | |||| ||||||||||| |||    ||||||U   UGGCGGUGAU UUUAGC UAAAGAUGU C CCAA GAAUUCUUUUG CAG    UUUUAGG UU          G      A         A A    A           A   -ACA
Stem-loop sequence	ACCGCCACUAGAAAUCGAUUUCUACAAGCGGUUCCUUAAGAAAACCGUCACUAGAAAUCAUGGAUUUUACAGACAGUUUUCUUAAGAAACCACAUGUAGAAAUACGAUUUGUAGUGGCGGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB166343.1	ncRNA:24   UUUGGCGGUGAUGUUUAGCAUAAA   1   ||||||||||||*||||||||||| targets:38   AAACCGCCACUAGAAAUCGUAUUU   61 Target Full Sequence	1.5	Sequence 4007 from Patent EP2559767	NA	coding protein	psRNATarget
HI405882.1	ncRNA:24   UUUGGCGGUGAUGUUUAGCAUAAA   1   ||||||||||||*||||||||||| targets:38   AAACCGCCACUAGAAAUCGUAUUU   61 Target Full Sequence	1.5	Sequence 4007 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238012.1	ncRNA:24   UUUGGCGGUGAUGUUUAGCAUAAA   1   ||||||||||||*||||||||||| targets:38   AAACCGCCACUAGAAAUCGUAUUU   61 Target Full Sequence	1.5	Sequence 4007 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235116.1	ncRNA:24   UUUGGCGGUGAUGUUUAGCAUAAA   1   ||||||||||||*||||||||||| targets:16   AAACCGCCACUAGAAAUCGUAUUU   39 Target Full Sequence	1.5	Sequence 1111 from Patent EP2985353	NA	coding protein	psRNATarget
HI402986.1	ncRNA:24   UUUGGCGGUGAUGUUUAGCAUAAA   1   ||||||||||||*||||||||||| targets:16   AAACCGCCACUAGAAAUCGUAUUU   39 Target Full Sequence	1.5	Sequence 1111 from Patent EP2074227	NA	coding protein	psRNATarget
JB163447.1	ncRNA:24   UUUGGCGGUGAUGUUUAGCAUAAA   1   ||||||||||||*||||||||||| targets:16   AAACCGCCACUAGAAAUCGUAUUU   39 Target Full Sequence	1.5	Sequence 1111 from Patent EP2559767	NA	coding protein	psRNATarget