ncRNA ID | novel_zma_miR5192 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:209127666-209127760 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287164 |
Length | 24 |
Mature sequence(if miRNA) | 72 - AUUUUCACUGUCGGUUUUAAAACA - 95 |
Stem-loop(if miRNA) |
-UUAAG       U                 CC   U    --G   C       AAAACCG CAGUGAAAAUAACAUUU  GCU GUGG   UCU U       ||||||| |||||||||||||||||  ||| ||||   |||       UUUUGGC GUCACUUUUAUUGUAAA  UGA CACC   AGA U ACAAAA       U                 CA   C    AAA   A |
Stem-loop sequence | UUAAGAAAACCGUCAGUGAAAAUAACAUUUCCGCUUGUGGGUCUCUUAAGAAAACCACCAGUACAAAUGUUAUUUUCACUGUCGGUUUUAAAACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001150001.1 |
|
1.5 | Zea mays uncharacterized LOC100276144 (LOC100276144), mRNA | NA | coding protein | psRNATarget | |||||||||
EU960305.1 |
|
1.5 | Zea mays clone 223391 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
EU944461.1 |
|
1.5 | Zea mays clone 219441 mRNA sequence | NA | coding protein | psRNATarget |